HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	12.3	4.1	0.0028	0.17	2	21	11	30
2	11.4	0.1	0.0055	0.33	1	21	43	63
3	5.9	1.3	0.32	19	4	23	120	145
4	19.0	2.2	2.2e-05	0.0013	1	23	154	176
5	8.4	0.4	0.051	3.1	1	23	182	205

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 0.0028
                   EETTTTEEESSHHHHHHHHH CS
        zf-C2H2  2 kCpdCgksFkrksnLkrHir 21
                   +C++C++ Fk+  ++ +H++
  KWMTBOMO06340 11 YCHHCDMNFKNEMSYYQHMK 30
                   6******************8 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.0055
                   EEETTTTEEESSHHHHHHHHH CS
        zf-C2H2  1 ykCpdCgksFkrksnLkrHir 21
                   y C+ C+k+F     L+ H +
  KWMTBOMO06340 43 YACELCDKKFVKAARLEEHNM 63
                   88***************9966 PP

  == domain 3  score: 5.9 bits;  conditional E-value: 0.32
                    T.TTT....EEESSHHHHHHHHHC.C CS
        zf-C2H2   4 p.dCg....ksFkrksnLkrHirt.H 23 
                      +Cg    + ++++  L++H r+ H
  KWMTBOMO06340 120 LtVCGgvlrQACPSRAALRTHTRRtH 145
                    557888888999************99 PP

  == domain 4  score: 19.0 bits;  conditional E-value: 2.2e-05
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    ++C+ Cgk +++k  L+ H r+H
  KWMTBOMO06340 154 HVCHACGKAYTTKKTLEGHVRSH 176
                    79********************9 PP

  == domain 5  score: 8.4 bits;  conditional E-value: 0.051
                    EEETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirt.H 23 
                    + C+ C+ +F+    L +H +  H
  KWMTBOMO06340 182 FACTRCPSTFRYEAALYNHNKLvH 205
                    78*****************98877 PP