Gene | Transcription Factor Family | Full Seq Evalue | Best Domain Evalue | Domain Number | Alignment Detail |
---|---|---|---|---|---|
KWMTBOMO06310 | bHLH | 1.2e-25 | 5.1e-12 | 2 | + View |
HMM length of domain: 55 aa c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs. i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. Domain annotation for each sequence: # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to -- ----- ---- -------- -------- ------- ------ ------- ------ --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 45.5 0.3 1.5e-14 5.1e-12 1 41 121 159 2 45.4 0.5 1.5e-14 5.3e-12 9 54 160 203 Alignments for each domain: == domain 1 score: 45.5 bits; conditional E-value: 1.5e-14 CHHHHHHHHHHHHHHHHHHHHHHHHCSCC.CH.TTSS-STHH CS bHLH 1 rRtahnerErrRRdriNdafeeLrellPk.askakskKlsKa 41 rRt++n+ ErrR ++iN+af+ Lr+++P+ + +++KlsK KWMTBOMO06310 121 RRTTANKKERRRTENINTAFSDLRDCIPNvP---PDTKLSKM 159 8****************************99...*******6 PP == domain 2 score: 45.4 bits; conditional E-value: 1.5e-14 HHHHHHHHHHHHHHHHHCSCC.CH.TTSS-STHHHHHHHHHHHHHHH CS bHLH 9 ErrRRdriNdafeeLrellPk.askakskKlsKaeiLekAveYIkqL 54 r+R + iN af+ Lr+++P+ + +++K++K+ +L++A+ YI++L KWMTBOMO06310 160 VRKRSQTINIAFSNLRQHIPHvL---PDTKMTKIKTLRLATSYISYL 203 59*******************99...*******************98 PP |
渝公网安备 50010602502065号