HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	7.7	0.1	0.085	5.1	6	23	2	20
2	15.5	0.2	0.00027	0.016	1	23	26	49
3	16.5	1.0	0.00014	0.0081	1	23	59	81
4	19.5	1.2	1.5e-05	0.00087	2	23	88	110

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.085
                   TTEEESSHHHHHHHHHC.C CS
        zf-C2H2  6 CgksFkrksnLkrHirt.H 23
                   C+k +++k+ ++ H +  H
  KWMTBOMO06200  2 CNKGYPTKEAMQDHFNYqH 20
                   **************98877 PP

  == domain 2  score: 15.5 bits;  conditional E-value: 0.00027
                   EEETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2  1 ykCpdCgksFkrksnLkrHirt.H 23
                   +kCp+C k+  ++ n ++H ++ H
  KWMTBOMO06200 26 HKCPVCEKPIASRANVVKHVMRvH 49
                   79*******************999 PP

  == domain 3  score: 16.5 bits;  conditional E-value: 0.00014
                   EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2  1 ykCpdCgksFkrksnLkrHirtH 23
                   + C+ C k+F++k  L++H  +H
  KWMTBOMO06200 59 HACGMCRKRFTDKKALTQHEVIH 81
                   56*****************8776 PP

  == domain 4  score: 19.5 bits;  conditional E-value: 1.5e-05
                    EETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   2 kCpdCgksFkrksnLkrHirt.H 23 
                    +C++C ++Fk+k +L +H ++ H
  KWMTBOMO06200  88 TCDICQQTFKQKASLYTHKKRvH 110
                    8*******************999 PP