Gene

KWMTBOMO06200

Pre Gene Modal

BGIBMGA001656

Annotation

PREDICTED:_zinc_finger_and_BTB_domain-containing_protein_41-like_[Bombyx_mori]

Location

Bomo_Chr11(-):2226224-2228910      View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 2.584

CDS

ATGTGCAACAAGGGCTACCCGACGAAGGAAGCGATGCAGGACCACTTCAACTACCAGCACCTGGGGAAGACGGCGCACAAGTGTCCCGTGTGCGAAAAGCCCATAGCCTCCAGGGCGAATGTTGTGAAGCACGTGATGAGGGTGCACGGCGAGAAGAAGGAGAAGCCGAGGAACCACGCCTGCGGGATGTGCAGGAAACGGTTCACTGACAAGAAGGCTCTGACTCAGCACGAGGTGATCCACTCCCGGGAGAGGCCGCTGACCTGCGACATCTGCCAACAAACCTTCAAGCAGAAGGCCTCTCTTTACACGCACAAGAAGAGGGTCCACAAAGTCGTGCCCAACAAGAAAGTCGTTGAATTCATTGAGGCGACGGCTTAG

Protein

MCNKGYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASRANVVKHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQHEVIHSRERPLTCDICQQTFKQKASLYTHKKRVHKVVPNKKVVEFIEATA

Uniprot

H9IWM4   S4NN42   A0A2A4J9S1   A0A212F8F4   A0A2H1VWX0   A0A1E1W6H5   + More
A0A0N1IJT5   A0A0N1PHY6   A0A0N1IEI9   A0A2A4JCU5   A0A194Q532   A0A212F479   S4PHB1   A0A0L7KSP2   S4PRB7   A0A3S2NV19   A0A194Q4K3   A0A2W1BK83   A0A194QRA1   A0A2H1WUB2   S4PEZ1   A0A2J7Q4B9   A0A2L2YHF1   A0A0N0PBL1   A0A212FA07   A0A2A4J7P7   H9IWM9   A0A0N1IFW2   A0A087V0W8   A0A2A4JMU5   A0A0J7L1L6   A0A0N0PAK7   A0A3S2L580   A0A3B3ZBE0   A0A087TF09   A0A087UCD0   S4P3B4   A0A3S2NQN3   A0A087TG18   A0A0N1ICJ9   A0A0L8GHJ3   A0A087TUW7   A0A2P6KBF7   A0A3Q2G8Q1   A0A067R7K3   A0A2P8XD35   A0A2A4JBW6   A0A2H1WLQ9   A0A087V0W9   A0A0P5QFC0   A0A0P5R345   A0A0N8BUV5   A0A2W1B042   A0A2P8YGJ1   A0A131Y2W7   A0A087UA88   Q17MJ3   A0A0P5XLI7   A0A087UAK8   A0A0P5RY48   A0A0P5WGB2   A0A1B6EKM9   A0A0P5SJR4   A0A0P4YY80   A0A087TW41   A0A087T3Y6   A0A087U241   A0A0P5WK99   V4CBL5   A0A0P5E7I6   A0A0P5S9U1   A0A087V0T8   A0A0P5VJ40   A0A2P6KGY8   A0A067QTB7   A0A087V185   A0A2L2Z0J1   A0A0P5UK33   A0A3B3ZAU8   A0A087T206   A0A087V0T5   A0A3Q3BL37   A0A067R6D9   A0A087UDR9   R7VK40   A0A087U2E2   A0A087UAB3   V5HCN4   A0A232F202   A0A087V147   A0A0P6IXG9   A0A131Y1F7   A0A2L2YGM0   A0A147BPZ4   A0A2J7QR43   A0A3P9A1Y1  

Pubmed

19121390    23622113    22118469    26354079    26227816    28756777    + More
26561354    25463417    24845553    29403074    17510324    23254933    25765539    28648823    26999592    29652888    25069045   

EMBL

BABH01021167    GAIX01014096    JAA78464.1    NWSH01002274    PCG68711.1    AGBW02009729    + More
OWR50026.1    ODYU01004954    SOQ45347.1    GDQN01008479    JAT82575.1    KQ459795    KPJ19918.1    KQ460555    KPJ14020.1    KQ458486    KPJ05869.1    NWSH01002068    PCG69260.1    KQ459463    KPJ00469.1    AGBW02010415    OWR48546.1    GAIX01000529    JAA92031.1    JTDY01006108    KOB66277.1    GAIX01000940    JAA91620.1    RSAL01000063    RVE49479.1    KPJ00468.1    KZ149995    PZC75449.1    KQ461198    KPJ06061.1    ODYU01010720    SOQ56004.1    GAIX01006840    JAA85720.1    NEVH01018385    PNF23428.1    IAAA01022758    IAAA01022759    LAA07467.1    KQ460969    KPJ10206.1    AGBW02009535    OWR50564.1    NWSH01002684    PCG67688.1    BABH01021155    KQ460140    KPJ17511.1    KL815794    KFM83257.1    NWSH01000953    PCG73395.1    LBMM01001240    KMQ96662.1    KQ458725    KPJ05348.1    RSAL01000142    RVE46032.1    KK114917    KFM63698.1    KK119191    KFM75019.1    GAIX01006514    JAA86046.1    RVE46029.1    KK115050    KFM64057.1    KPJ05382.1    KQ421769    KOF76466.1    KK116841    KFM68906.1    MWRG01017106    PRD23668.1    KK852889    KDR14291.1    PYGN01002835    PSN29910.1    PCG69256.1    ODYU01009516    SOQ54010.1    KFM83258.1    GDIQ01121621    JAL30105.1    GDIQ01233588    GDIQ01106132    GDIP01092879    JAL45594.1    JAM10836.1    GDIQ01142619    GDIP01124031    JAL09107.1    JAL79683.1    KZ150535    PZC70589.1    PYGN01000611    PSN43378.1    GEFM01002971    JAP72825.1    KK118960    KFM74277.1    CH477205    EAT47931.1    GDIP01070581    GDIQ01041460    JAM33134.1    JAN53277.1    KK119017    KFM74397.1    GDIQ01095521    JAL56205.1    GDIP01087188    JAM16527.1    GECZ01031294    JAS38475.1    GDIP01142587    JAL61127.1    GDIP01225320    JAI98081.1    KK117015    KFM69330.1    KK113288    KFM59825.1    KK117791    KFM71430.1    GDIP01097938    JAM05777.1    KB201038    ESO99264.1    GDIP01150523    JAJ72879.1    GDIP01142586    JAL61128.1    KL815034    KFM83227.1    GDIP01099278    JAM04437.1    MWRG01012206    PRD25592.1    KK852956    KDR13254.1    KL819331    KFM83374.1    IAAA01079269    LAA13240.1    GDIP01115822    JAL87892.1    KK113026    KFM59145.1    KL815010    KFM83224.1    KK852669    KDR18850.1    KK119373    KFM75508.1    AMQN01017480    KB293165    ELU16455.1    KK117836    KFM71531.1    KK118972    KFM74302.1    GANP01003193    JAB81275.1    NNAY01001291    OXU24467.1    KL818092    KFM83336.1    GDUN01000414    JAN95505.1    GEFM01003606    JAP72190.1    IAAA01027786    LAA07187.1    GEGO01002571    JAR92833.1    NEVH01011997    PNF31045.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053240    UP000053268    UP000037510    + More
UP000283053    UP000235965    UP000054359    UP000036403    UP000261520    UP000053454    UP000265020    UP000027135    UP000245037    UP000008820    UP000030746    UP000264800    UP000014760    UP000215335    UP000265140   

PRIDE

H9IWM4    H9IWM9   

Pfam

PF05605   zf-Di19        + More
PF00096   zf-C2H2
PF07776   zf-AD
PF12171   zf-C2H2_jaz

Interpro

IPR008598   Di19_Zn_binding_dom        + More
IPR036236   Znf_C2H2_sf       
IPR013087   Znf_C2H2_type       
IPR012934   Znf_AD       
IPR022755   Znf_C2H2_jaz       
IPR003604   Matrin/U1-like-C_Znf_C2H2       
IPR003656   Znf_BED       
IPR017114   YY-1-like       
IPR011017   TRASH_dom       

SUPFAM

SSF57667   SSF57667       

ProteinModelPortal

H9IWM4   S4NN42   A0A2A4J9S1   A0A212F8F4   A0A2H1VWX0   A0A1E1W6H5   + More
A0A0N1IJT5   A0A0N1PHY6   A0A0N1IEI9   A0A2A4JCU5   A0A194Q532   A0A212F479   S4PHB1   A0A0L7KSP2   S4PRB7   A0A3S2NV19   A0A194Q4K3   A0A2W1BK83   A0A194QRA1   A0A2H1WUB2   S4PEZ1   A0A2J7Q4B9   A0A2L2YHF1   A0A0N0PBL1   A0A212FA07   A0A2A4J7P7   H9IWM9   A0A0N1IFW2   A0A087V0W8   A0A2A4JMU5   A0A0J7L1L6   A0A0N0PAK7   A0A3S2L580   A0A3B3ZBE0   A0A087TF09   A0A087UCD0   S4P3B4   A0A3S2NQN3   A0A087TG18   A0A0N1ICJ9   A0A0L8GHJ3   A0A087TUW7   A0A2P6KBF7   A0A3Q2G8Q1   A0A067R7K3   A0A2P8XD35   A0A2A4JBW6   A0A2H1WLQ9   A0A087V0W9   A0A0P5QFC0   A0A0P5R345   A0A0N8BUV5   A0A2W1B042   A0A2P8YGJ1   A0A131Y2W7   A0A087UA88   Q17MJ3   A0A0P5XLI7   A0A087UAK8   A0A0P5RY48   A0A0P5WGB2   A0A1B6EKM9   A0A0P5SJR4   A0A0P4YY80   A0A087TW41   A0A087T3Y6   A0A087U241   A0A0P5WK99   V4CBL5   A0A0P5E7I6   A0A0P5S9U1   A0A087V0T8   A0A0P5VJ40   A0A2P6KGY8   A0A067QTB7   A0A087V185   A0A2L2Z0J1   A0A0P5UK33   A0A3B3ZAU8   A0A087T206   A0A087V0T5   A0A3Q3BL37   A0A067R6D9   A0A087UDR9   R7VK40   A0A087U2E2   A0A087UAB3   V5HCN4   A0A232F202   A0A087V147   A0A0P6IXG9   A0A131Y1F7   A0A2L2YGM0   A0A147BPZ4   A0A2J7QR43   A0A3P9A1Y1  

PDB

2I13     E-value=5.75938e-07,     Score=121

KEGG

101742326    no KO assigned | (RefSeq) zinc finger and BTB domain-containing protein 41-like

GO

GO:0003676   GO:0008270   GO:0005634   GO:0046872   GO:0003677   GO:0008168   GO:0005215   GO:0022857   GO:0004559   GO:0006013   GO:0015923   GO:0006260  

Length:

126

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.42136

outside

1  -  126

 

 

Pi

156.819073

Theta

139.870282

Tajima's D

1.183047

CLR

0

CSRT

0.710814459277036

Interpretation

Uncertain