渝公网安备 50010602502065号
| Gene | Transcription Factor Family | Full Seq Evalue | Best Domain Evalue | Domain Number | Alignment Detail |
|---|---|---|---|---|---|
| KWMTBOMO05841 | zf-C2H2 | 1.9e-38 | 9.2e-06 | 20 | + View |
HMM length of domain: 23 aa
c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified.
Domain annotation for each sequence:
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to
-- ----- ---- -------- -------- ------- ------ ------- ------
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 9.9 1.1 0.016 0.97 3 23 602 623
2 5.1 0.4 0.55 33 1 22 1000 1021
3 8.4 0.1 0.049 3 3 23 1097 1118
4 10.7 2.4 0.009 0.54 2 23 1125 1147
5 5.4 0.0 0.43 26 1 22 1173 1194
6 8.8 3.2 0.038 2.2 1 23 1201 1223
7 9.6 0.2 0.02 1.2 1 23 1229 1252
8 13.4 1.4 0.0013 0.077 1 23 1264 1286
9 10.7 3.4 0.0094 0.56 1 23 1336 1359
10 9.9 1.1 0.017 0.99 1 23 1419 1442
11 8.3 2.0 0.052 3.1 2 23 1471 1493
12 7.7 0.1 0.083 5 3 23 1500 1521
13 6.5 0.1 0.2 12 1 21 1566 1586
14 15.5 0.8 0.00027 0.016 1 23 1597 1619
15 15.6 0.2 0.00025 0.015 3 23 1710 1731
16 25.8 1.3 1.5e-07 9.2e-06 3 23 1738 1758
17 9.1 1.1 0.03 1.8 2 23 1778 1799
18 5.2 0.0 0.52 31 1 23 1822 1844
19 7.3 0.6 0.11 6.7 1 23 1850 1873
20 16.2 0.8 0.00017 0.01 1 23 1881 1904
Alignments for each domain:
== domain 1 score: 9.9 bits; conditional E-value: 0.016
ETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 3 CpdCgksFkrksnLkrHirt.H 23
C +Cg+s++ ++n +rH t H
KWMTBOMO05841 602 CLVCGRSYRYSHNARRHELTaH 623
99***************99988 PP
== domain 2 score: 5.1 bits; conditional E-value: 0.55
EEETTTTEEESSHHHHHHHHHC CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt 22
++C C +F + L +H+r+
KWMTBOMO05841 1000 HTCYNCVVTFGHIGALLSHMRS 1021
79******************95 PP
== domain 3 score: 8.4 bits; conditional E-value: 0.049
ETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 3 CpdCgksFkrksnLkrHirt.H 23
Cp+Cgk+ ++ +L++H+++ H
KWMTBOMO05841 1097 CPVCGKKNTNYPSLVKHLKIiH 1118
*******************988 PP
== domain 4 score: 10.7 bits; conditional E-value: 0.009
EETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 2 kCpdCgksFkrksnLkrHirt.H 23
C +C+ +F + +L++Hi t H
KWMTBOMO05841 1125 FCQHCDSKFEQAADLNKHIYTeH 1147
6******************9999 PP
== domain 5 score: 5.4 bits; conditional E-value: 0.43
EEETTTTEEESSHHHHHHHHHC CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt 22
y C++C+ F + + + H+
KWMTBOMO05841 1173 YSCTECNAIFETVDAWTDHQVA 1194
89*****************865 PP
== domain 6 score: 8.8 bits; conditional E-value: 0.038
EEETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23
+ C+ C k+F r+s+L H +tH
KWMTBOMO05841 1201 HHCDQCEKKFLRPSELAEHKNTH 1223
67********************9 PP
== domain 7 score: 9.6 bits; conditional E-value: 0.02
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
y+C+ C+ s++++ L H + H
KWMTBOMO05841 1229 YPCSLCSNSYSTPQKLADHVQQiH 1252
99*****************99877 PP
== domain 8 score: 13.4 bits; conditional E-value: 0.0013
EEETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23
++C++C +sFk++ + +H+r+H
KWMTBOMO05841 1264 FYCDICIRSFKSRQAYSNHMRIH 1286
89********************9 PP
== domain 9 score: 10.7 bits; conditional E-value: 0.0094
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
y C++Cgk F +k n +H ++ H
KWMTBOMO05841 1336 YCCDICGKGFMHKKNIWKHKKVlH 1359
88******************9988 PP
== domain 10 score: 9.9 bits; conditional E-value: 0.017
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
y C+ C ++F+ + L +H r H
KWMTBOMO05841 1419 YSCELCYQRFPVRNALWKHKRNkH 1442
89*******************988 PP
== domain 11 score: 8.3 bits; conditional E-value: 0.052
EETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 2 kCpdCgksFkrksnLkrHirt.H 23
C++C+ F +k ++ rH++ H
KWMTBOMO05841 1471 SCTICKINFADKKSYYRHRKNfH 1493
5******************9988 PP
== domain 12 score: 7.7 bits; conditional E-value: 0.083
ETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 3 CpdCgksFkrksnLkrHirt.H 23
C++Cgk+ ++ +L H++ H
KWMTBOMO05841 1500 CKICGKPLSSTLELYEHLKAaH 1521
*****************99877 PP
== domain 13 score: 6.5 bits; conditional E-value: 0.2
EEETTTTEEESSHHHHHHHHH CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHir 21
y+C+ Cgk F L++H++
KWMTBOMO05841 1566 YPCEACGKQFVGLLALQNHQC 1586
89*****************86 PP
== domain 14 score: 15.5 bits; conditional E-value: 0.00027
EEETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23
++C++C+ks+++ s Lk+H+ H
KWMTBOMO05841 1597 FECEICHKSYTSISALKSHRGWH 1619
89*****************8766 PP
== domain 15 score: 15.6 bits; conditional E-value: 0.00025
ETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 3 CpdCgksFkrksnLkrHirt.H 23
C++C+k F+ + ++rH+ H
KWMTBOMO05841 1710 CGICDKEFTKRAAYQRHMDEvH 1731
******************8877 PP
== domain 16 score: 25.8 bits; conditional E-value: 1.5e-07
ETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 3 CpdCgksFkrksnLkrHirtH 23
Cp+C+ksF+rks L +H+++H
KWMTBOMO05841 1738 CPVCDKSFTRKSTLIVHMKKH 1758
********************9 PP
== domain 17 score: 9.1 bits; conditional E-value: 0.03
EETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 2 kCpdCgksFkrksnLkrHirtH 23
C+ Cg + + + L++H ++H
KWMTBOMO05841 1778 ACDLCGAQYDNADALRSHKMRH 1799
6********************6 PP
== domain 18 score: 5.2 bits; conditional E-value: 0.52
EEETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23
++C Cg ++ +L +H+ +H
KWMTBOMO05841 1822 FTCAQCGDGVATPRDLIAHRTMH 1844
89******************998 PP
== domain 19 score: 7.3 bits; conditional E-value: 0.11
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
+ C++C+ F r +L +H r H
KWMTBOMO05841 1850 FFCNICKVYFARALDLSTHTRArH 1873
78******************9888 PP
== domain 20 score: 16.2 bits; conditional E-value: 0.00017
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
++C C++s+ +k +L+rHi + H
KWMTBOMO05841 1881 FPCAMCDRSYMNKKSLQRHIEMsH 1904
89******************9988 PP
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渝公网安备 50010602502065号