HMM length of domain: 47 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	-2.0	0.0	3.9	3.8e+03	31	46	40	58
2	7.9	0.0	0.0032	3.2	2	31	291	323
3	31.8	0.0	1.1e-10	1.1e-07	2	44	372	418

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 3.9
                   HS...SS-HHHHHHHHHHH CS
            MYB 31 lg...gRtakqcrsrwqny 46
                   +g     t+ q++s ++++
  KWMTBOMO05445 40 MGvsqDATPAQIKSAFKKL 58
                   4444478999999877765 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.0032
                    SSS-HHHHHHHHHHHHHHTTT...THHHHHHHH CS
            MYB   2 gkWteeEdelLleaveklGng...nWkkIakel 31 
                    g Wt ++   L+++  + ++g   +W++Ia+ l
  KWMTBOMO05445 291 GLWTDDDLAELARLMSRVPGGapqRWERIAAAL 323
                    56****************************977 PP

  == domain 3  score: 31.8 bits;  conditional E-value: 1.1e-10
                    SSS-HHHHHHHHHHHHHHTTT....THHHHHHHHSSS-HHHHHHHHH CS
            MYB   2 gkWteeEdelLleaveklGng....nWkkIakelggRtakqcrsrwq 44 
                    g+W++  ++ L+ a++k+++g    +W kI++ ++g+t+++c  r +
  KWMTBOMO05445 372 GAWSQSQQKALETALAKYPKGgagdRWQKISNSVPGKTKEECMQRCK 418
                    89*****************************************9975 PP