Silkworm Genome Informatics Database

Gene

KWMTBOMO05445 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA006645

Annotation

hypothetical_protein_KGM_00415_[Danaus_plexippus]

Location

Bomo_Chr10(-):2448769-2454272 View in EpiBrowser

Transcription factor

MYB

Location in the cell

Nuclear Reliability : 3.055

CDS

ATGCGTTGGATATTTTTGTTGTTGTTAACGTTTGTTTTGAGCGTCGCTGCGTGGGACGATGATGATTTAGAAGTATTTGACGTGGTGGAAGAAGTTAACCAGAACTTTTATGAACTGATGGGAGTTAGTCAGGATGCGACGCCAGCACAAATAAAATCAGCGTTCAAAAAACTGACACTGAAACTGCATCCGGACAAAAATGATTCTCCAGATGCTGATGTACAGTTTAGAAACTTGGTTTCTGTGCATAATGTACTTAAAGACCCTGGAAAGAGAGAAAAGTACAATGAAGTCCTCAAAAATGGTTTACCTAACTGGCGCTCAGCAGTATACTACTATCGACATCTACGCAAGATGGGCTTGGCAGAGGCCTCCATAATATTGTTCATAATCATTTCATTAGGACAGTATGCTGTTAGTTGGGCTGCATACGTCGAGAAGAGGTACACGGCAGAGCAAATTTTAAACAGCAGAGGCAGGAAGTCAAAAAAAACTGGCTTTGACGTTGGTCTCTCTGAGATATTAGACCAATTACCCAAACCTAGTGTGAAGGACACCTTGCCGTTCCAAATACCGCGACTGGCGTGGTGGACGGTGACCGCGATACCGCGGAGCTACGTAGAAATTAAAAAGCAGCTGAAAGAGAAAGAAGAAGAAGCTAAGCGACAAAAGAAAAGGGAGGAGGAAGAGAAGCAGAGGTTAGAGCGAGAGGCTGCCGCTGCAGCGGAGAGAGAGAGCGCGGGCGCGGCGGGGACGCGGCGCCGGCGCGGGTTCGTGCCGCCGGAGCTCGAGCACGACGCGAGGCCGCGCCCCCCGCACGACCCCGCCGCGACCCTCGAGGATAAACCGAGTTCCCCGATGATATCCGGCGGGCTGTGGACGGACGACGACCTGGCGGAGCTGGCGCGGCTGATGTCCCGCGTGCCGGGCGGCGCCCCGCAGCGCTGGGAGCGCATCGCCGCCGCGCTGCGCCGCGCCGTGCCCGAGGTGGCGCACATGGCCGCCAAGCTCAAGGAGCGCCCGCACCGCCCGCCCGGACACGAGCCCCCGCAGCCGGAATACGTGGAGCCGCCCAAAAAGGTCAAAACACGGAAAGAAGAGACAGGTAGCGGCGGTGCCTGGTCCCAGAGCCAGCAGAAGGCTCTAGAGACAGCCCTCGCCAAGTACCCGAAGGGTGGCGCCGGCGACCGGTGGCAGAAGATCTCCAATTCTGTACCCGGGAAGACAAAGGAGGAATGCATGCAACGATGTAAATATTTATCAGACATGTTGAGGAAACAAAAACAGAAAGAAGAAGAAGAAAAGCAAAAAGAAGAAGATGTTGATGAAGGGCAGAGTCAGGAGAATGGTGACGTCACACAAAACGGCTTTGAAGAAACGAACGATGAGAACTCTTCCTAA

Protein

MRWIFLLLLTFVLSVAAWDDDDLEVFDVVEEVNQNFYELMGVSQDATPAQIKSAFKKLTLKLHPDKNDSPDADVQFRNLVSVHNVLKDPGKREKYNEVLKNGLPNWRSAVYYYRHLRKMGLAEASIILFIIISLGQYAVSWAAYVEKRYTAEQILNSRGRKSKKTGFDVGLSEILDQLPKPSVKDTLPFQIPRLAWWTVTAIPRSYVEIKKQLKEKEEEAKRQKKREEEEKQRLEREAAAAAERESAGAAGTRRRRGFVPPELEHDARPRPPHDPAATLEDKPSSPMISGGLWTDDDLAELARLMSRVPGGAPQRWERIAAALRRAVPEVAHMAAKLKERPHRPPGHEPPQPEYVEPPKKVKTRKEETGSGGAWSQSQQKALETALAKYPKGGAGDRWQKISNSVPGKTKEECMQRCKYLSDMLRKQKQKEEEEKQKEEDVDEGQSQENGDVTQNGFEETNDENSS

Uniprot

H9JAV0 A0A1C9EGF4 A0A194QNE4 E2BY64 A0A084VX69 A0A182PT65 + More
A0A1Q3FDL0 Q17EI0 A0A182JAY5 A0A182UPF9 A0A182YCU2 B4M389 A0A1S4F5N1 A0A0P4VUM6 W5JVG4 B4I716 U5ESS3 B0XE62 A0A182GWG0 T1HSB5 A0A1B6GJX0

Pubmed

19121390 26354079 20798317 24438588 17510324 25244985 + More
17994087 27129103 20920257 23761445 26483478

EMBL

BABH01008404 KX778609 AON96580.1 KQ458793 KPJ05006.1 GL451420 + More
EFN79343.1 ATLV01017851 KE525195 KFB42563.1 GFDL01009384 JAV25661.1 CH477282 EAT44899.1 CH940651 EDW65264.1 GDKW01000340 JAI56255.1 ADMH02000220 ETN67333.1 CH480823 EDW56114.1 GANO01002229 JAB57642.1 DS232806 EDS45896.1 JXUM01019652 KQ560550 KXJ81926.1 ACPB03020840 GECZ01007044 JAS62725.1

Proteomes

UP000005204 UP000053268 UP000008237 UP000030765 UP000075885 UP000008820 + More
UP000075880 UP000075903 UP000076408 UP000008792 UP000000673 UP000001292 UP000002320 UP000069940 UP000249989 UP000015103

PRIDE

H9JAV0

Pfam

PF00226 DnaJ + More
PF00249 Myb_DNA-binding

Interpro

IPR001623   DnaJ_domain        + More
IPR036869   J_dom_sf
IPR017877   Myb-like_dom
IPR001005   SANT/Myb
IPR009057   Homeobox-like_sf
IPR018253   DnaJ_domain_CS
IPR017884   SANT_dom

SUPFAM

SSF46689 SSF46689 + More
SSF46565 SSF46565

Gene 3D

1.10.287.110

CDD

cd06257 DnaJ
cd00167 SANT

ProteinModelPortal

H9JAV0 A0A1C9EGF4 A0A194QNE4 E2BY64 A0A084VX69 A0A182PT65 + More
A0A1Q3FDL0 Q17EI0 A0A182JAY5 A0A182UPF9 A0A182YCU2 B4M389 A0A1S4F5N1 A0A0P4VUM6 W5JVG4 B4I716 U5ESS3 B0XE62 A0A182GWG0 T1HSB5 A0A1B6GJX0

PDB

3APQ E-value=1.53132e-12, Score=177

KEGG

101739750 K09521 DnaJ homolog subfamily C member 1 | (RefSeq) DnaJ-26; uncharacterized protein F54F2.9

PATHWAY

04141 Protein processing in endoplasmic reticulum - Bombyx mori (domestic silkworm)

GO

GO:0003677 GO:0016021 GO:0005634 GO:0005576 GO:0006030 GO:0008061 GO:0006631 GO:0050660 GO:0016627 GO:0008152 GO:0016491 GO:0003824

Subcellular location

Nucleus

SignalP

Position: 1 - 17, Likelihood: 0.998814

Length:

466

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

18.19623

Exp number, first 60 AAs:

1.0182

Total prob of N-in:

0.54263

outside

1 - 466

Pi

256.235855

Theta

198.204597

Tajima's D

0.600136

CLR

0.175193

CSRT

0.543672816359182

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics