Gene | Transcription Factor Family | Full Seq Evalue | Best Domain Evalue | Domain Number | Alignment Detail |
---|---|---|---|---|---|
KWMTBOMO04442 | bHLH | 1.9e-05 | 1.9e-05 | 1 | + View |
HMM length of domain: 55 aa c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs. i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. Domain annotation for each sequence: # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to -- ----- ---- -------- -------- ------- ------ ------- ------ --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 24.4 2.3 5.4e-08 1.9e-05 2 50 64 111 Alignments for each domain: == domain 1 score: 24.4 bits; conditional E-value: 5.4e-08 HHHHHHHHHHHHHHHHHHHHHHHHCSCC.CH.TTSS-STHHHHHHHHHHH CS bHLH 2 RtahnerErrRRdriNdafeeLrellPk.askakskKlsKaeiLekAveY 50 R++ ++E+ RR++ N +++ ++ll a ++K++K +iL++Av+ KWMTBOMO04442 64 RASRIIAEKTRRSQYNALIHQMKSLLSDiA--HSQRKVDKTSILRHAVNK 111 778889**********************98..67777**********985 PP |
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