Gene

KWMTBOMO04442

Pre Gene Modal

BGIBMGA005416

Annotation

methoprene-tolerant_protein_1_[Bombyx_mori]

Location

Bomo_Chr8(+):6744273-6746009      View in EpiBrowser

Transcription factor

bHLH

Location in the cell

Nuclear   Reliability : 4.138

CDS

ATGAACTCGTCTATTGGGACAGGATCGAATTACGAGAAATGCTCTAAGATGGCAACTCGGGAGCCGGCAGAGTTTCTGCCCGTGGCAGTGACAACAAATTGCGTTTACTATGATTCACAAGCTGCAAGCTGCGGAGACTCTTCTTCAGATTCACGTTCGCCAGAGACTACTTCAGCAAAGGCTAGCGATCGTGCTTCTCGAATCATTGCAGAAAAAACTCGTCGCAGCCAGTACAATGCATTAATCCATCAAATGAAGTCTCTCCTATCGGACATTGCGCATTCCCAACGGAAAGTTGACAAAACTAGTATTTTGAGACACGCCGTCAACAAACTGCGTAACGAACACGTCTTTGGCGATACCATTAAATGCTGCCATCTAGAAACATGGTCCCCTGCATTTTTAAAGTTTTTTGATCTCATAGGAGGTATCATGTTTGCTGTCACTTGTCGGGGTCGCATTTTTATAGTTTCACCAAATATCCAAGAAAAATTAGGTTATTGCCATATAGATTTAGTAGGCCAGGATTTTTACAAATATGTTCATGAGGAAGACAGAGAAACCCTACGTTGTCACATTTACCCACCTGAACTTCAAACAGGCTGTGATGATCAACTTTTTGAACATAACCATAACTTTCATATTCGTCTGATGAGAGCAGGAGCAAGGTCTGATCATCCCAGATATGAAAAATGTCGTATTAGTGGTATGTTAAGAAAGTCTGATAGAGCTACTGGGAATGAAGTTCAAGATGAGCATGTAGTTAGAAGGCAAAGAGTACGGAATAATCGCACATTTTCCTCCAGTGGAAATGACTTTGTTTTTATTGGTATGATACGTGTGCTTTCTAGCAACTTGCCAGCTCGAATCTTGCCACCAACAGCTTATTCTGAATATTGGACGAGACATTTGATAGATGGCCGGATAGTACAATGTGATCAAAGCATATCATTGGCAGCTGGTTACATGACTGATGAAGTAACAGGTACTTCAGCTTTTGTTTTTATGCACAAAGAAGATGTGCGTTGGGTTATCTGTGTACTTCGTCAAATGTATGATCAGAGTCGAGAGTTTGGGGAATCATATTACAGGTTAATATCTCGTTCTGGTCACTTCATATATATGAGAACTAAAGGATATCTTGAAATTGATAAAAAAACTAAAAAAGTTCAAAGTTTTGTCTGTGTTAATACTGTTATTGGTGAGGAGTTTGGAAAAAGAATGATGGAAGAAATGAAACGAAAGTACTCAGTTATCGTAGGAATGGATAAACAACAACAAGAAAGAGTGTTGACTTATGATGATGCTCCGGTTGAACATCCAAAGTGTCTTGAGCGGATTGTAATGCATCTTGTGGAACCTTCCGTAAGTGAAAATGTAGATGAACTGAAGTTGGTGCCTCCTTCTAGAGAGAACATAATTTCTGCTATCAAAAGCAGTGAGAAAGTGGTTCAAGAAACTGGTATACGTTTTGAATCAAGAAAAAGGAAAAAAAATAATATAGATGACAGCTATGAGTATTTAAAAAGGCACAGTGGATTGTAA

Protein

MNSSIGTGSNYEKCSKMATREPAEFLPVAVTTNCVYYDSQAASCGDSSSDSRSPETTSAKASDRASRIIAEKTRRSQYNALIHQMKSLLSDIAHSQRKVDKTSILRHAVNKLRNEHVFGDTIKCCHLETWSPAFLKFFDLIGGIMFAVTCRGRIFIVSPNIQEKLGYCHIDLVGQDFYKYVHEEDRETLRCHIYPPELQTGCDDQLFEHNHNFHIRLMRAGARSDHPRYEKCRISGMLRKSDRATGNEVQDEHVVRRQRVRNNRTFSSSGNDFVFIGMIRVLSSNLPARILPPTAYSEYWTRHLIDGRIVQCDQSISLAAGYMTDEVTGTSAFVFMHKEDVRWVICVLRQMYDQSREFGESYYRLISRSGHFIYMRTKGYLEIDKKTKKVQSFVCVNTVIGEEFGKRMMEEMKRKYSVIVGMDKQQQERVLTYDDAPVEHPKCLERIVMHLVEPSVSENVDELKLVPPSRENIISAIKSSEKVVQETGIRFESRKRKKNNIDDSYEYLKRHSGL

Uniprot

B0LL81   H9J7C4   B6VB33   A0A3Q8UB92   A0A023PPA4   A0A1E1WMG6   + More
A0A2H1WH64   A0A0L7LG82   A0A1B2INL9   A0A290DSG2   A0A212FEP1   A0A194RBM2   U5ER17   A0A1L8DG79   A0A336KCZ4   B4R561   A0A336LQY1   A0A1L8DHG9   A0A1L8DHK9   A0A1L8DHA0   A0A182RPF2   A0A2H1VXM9   A0A182MNT8   A0A182KPF2   Q29JD8   Q9VXW7   A0A182PJJ1   B4PWL1   A0A182YCW7   A0A1B0CQB9   B3NTM6   A0A182NKC9   A0A182WKJ3   A0A182QYH5   Q5EFD7   A0A182ISC3   A0A1Q3FTU3   A0A182FCQ9   Q5EE11   Q17KB5   Q58FS0   Q4ZH01   A0A182GI95   B3MR82   A0A084W0Q6   A0A1Q3FTH3   B4ILF8   A0A2M3YZM3   A0A2M4BDB1   A0A1Q3FTK2   A0A1J1I5W3   A0A1S4EZU7   A0A2K9P5C3   Q7Q663   A0A3B0J9S9   T1PAE6   A0A0L0BLM0   B4JX85   A0A2M4A0I1   A0A2M4A0G3   Q2PT35   B4N211   B4M788   A0A2W1BSZ9   A0A1W4VFK7   A0A2M4BAV8   A0A1I8NGB4   A0A0M3QZ86   A0A1I8PHG3   B4L5Q0   A0A2M4CZ07   A0A1A9WWZ6   A0A1A9WAP8   A0A1B0ALM4   A0A1B0ABZ5   R4IJP6   A0A1A9ULG0   W5JN31   A0A1A9X7T0   A0A2M4CXT4   A0A182I1Q7   R4IJL6   A0A212FDU0   A0A1A9ZQE4   A0A0A1XMM1   A0A1B0BDG6   A0A1A9YJ64   D4Q9H9   B0LL82   A0A1A9UE24   A0A182X776   A0A0K8VAK9   A0A3G2KQA7   A0A034W909   A0A182HFD7   A0A0A1XNH9   W8B2P5  

Pubmed

23300902    22753472    19121390    26227816    22118469    26354079    + More
17994087    20966253    15632085    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    25244985    17166512    17510324    26483478    24438588    12364791    14747013    17210077    26108605    28756777    25315136    23499946    20920257    23761445    25830018    25348373    24495485   

EMBL

EU249371    AB359911    ABY76058.1    BAJ05085.1    BABH01013637    FJ361198    + More
ACJ04052.1    MH050927    AZL94115.1    KJ184572    KJ825895    AHX26585.1    AJW29006.1    GDQN01002916    JAT88138.1    ODYU01008646    SOQ52409.1    JTDY01001246    KOB74415.1    KT361877    ANZ54967.1    KX821731    ATB19377.1    AGBW02008921    OWR52183.1    KQ460397    KPJ15233.1    GANO01003978    JAB55893.1    GFDF01008622    JAV05462.1    UFQS01000067    UFQT01000067    SSW98950.1    SSX19332.1    CM000366    EDX17962.1    SSW98949.1    SSX19331.1    GFDF01008259    JAV05825.1    GFDF01008260    JAV05824.1    GFDF01008261    JAV05823.1    ODYU01005061    SOQ45568.1    AXCM01004842    CH379063    EAL32363.3    AE014298    BT132669    AAF48439.2    ADV37675.1    AEQ28953.1    AGB95406.1    AGB95408.1    CM000162    EDX01757.2    KRK06331.1    KRK06332.1    AJWK01023387    AJWK01023388    AJWK01023389    AJWK01023390    AJWK01023391    AJWK01023392    CH954180    EDV47030.2    AXCN02000407    AY895165    AAW81958.1    GFDL01004149    JAV30896.1    AY902310    AAW82472.1    CH477226    EAT47132.1    AY955097    AAX55681.1    DQ010403    AAY25027.1    JXUM01065716    JXUM01065717    JXUM01065718    JXUM01065719    KQ562361    KXJ76064.1    CH902622    EDV34287.2    ATLV01019151    KE525263    KFB43800.1    GFDL01004151    JAV30894.1    CH480871    EDW53821.1    GGFM01000969    MBW21720.1    GGFJ01001893    MBW51034.1    GFDL01004150    JAV30895.1    CVRI01000042    CRK95719.1    KY660529    AUO38590.1    AAAB01008960    EAA11757.4    OUUW01000003    SPP78695.1    KA645746    AFP60375.1    JRES01001701    KNC20843.1    CH916376    EDV95361.1    GGFK01000909    MBW34230.1    GGFK01000914    MBW34235.1    DQ303468    ABC18327.1    CH963925    EDW78400.2    CH940653    EDW62655.2    KZ149961    PZC76337.1    GGFJ01000980    MBW50121.1    CP012528    ALC48983.1    CH933811    EDW06509.2    GGFL01005920    MBW70098.1    JXJN01000025    CCAG010022741    JX291118    AFQ01087.1    ADMH02001054    ETN64300.1    GGFL01005897    MBW70075.1    APCN01000088    CCAG010020089    JX291119    AFQ01088.1    AGBW02008997    OWR51919.1    GBXI01002085    JAD12207.1    JXJN01012462    AB359912    BAJ05086.1    EU249372    ABY76059.1    GDHF01016734    JAI35580.1    MG763072    AYN61558.1    GAKP01008165    JAC50787.1    JXUM01005967    JXUM01005968    JXUM01005969    JXUM01005970    GBXI01001867    JAD12425.1    GAMC01011138    GAMC01011135    JAB95420.1   

Proteomes

UP000005204    UP000037510    UP000007151    UP000053240    UP000000304    UP000075900    + More
UP000075883    UP000075882    UP000001819    UP000000803    UP000075885    UP000002282    UP000076408    UP000092461    UP000008711    UP000075884    UP000075920    UP000075886    UP000075880    UP000069272    UP000008820    UP000069940    UP000249989    UP000007801    UP000030765    UP000001292    UP000183832    UP000007062    UP000268350    UP000037069    UP000001070    UP000007798    UP000008792    UP000192221    UP000095301    UP000092553    UP000095300    UP000009192    UP000091820    UP000092460    UP000092445    UP000092444    UP000078200    UP000000673    UP000092443    UP000075840    UP000076407   

PRIDE

B0LL81    H9J7C4    B6VB33    Q9VXW7    D4Q9H9    B0LL82    + More

Pfam

PF00010   HLH        + More
PF13426   PAS_9
PF00989   PAS

Interpro

IPR036638   HLH_DNA-bd_sf        + More
IPR000014   PAS       
IPR011598   bHLH_dom       
IPR035965   PAS-like_dom_sf       
IPR001610   PAC       
IPR001067   Nuc_translocat       
IPR016024   ARM-type_fold       
IPR013767   PAS_fold       

SUPFAM

SSF47459   SSF47459        + More
SSF55785   SSF55785       
SSF48371   SSF48371       

Gene 3D

4.10.280.10    

CDD

cd00083  HLH
cd00130  PAS

ProteinModelPortal

B0LL81   H9J7C4   B6VB33   A0A3Q8UB92   A0A023PPA4   A0A1E1WMG6   + More
A0A2H1WH64   A0A0L7LG82   A0A1B2INL9   A0A290DSG2   A0A212FEP1   A0A194RBM2   U5ER17   A0A1L8DG79   A0A336KCZ4   B4R561   A0A336LQY1   A0A1L8DHG9   A0A1L8DHK9   A0A1L8DHA0   A0A182RPF2   A0A2H1VXM9   A0A182MNT8   A0A182KPF2   Q29JD8   Q9VXW7   A0A182PJJ1   B4PWL1   A0A182YCW7   A0A1B0CQB9   B3NTM6   A0A182NKC9   A0A182WKJ3   A0A182QYH5   Q5EFD7   A0A182ISC3   A0A1Q3FTU3   A0A182FCQ9   Q5EE11   Q17KB5   Q58FS0   Q4ZH01   A0A182GI95   B3MR82   A0A084W0Q6   A0A1Q3FTH3   B4ILF8   A0A2M3YZM3   A0A2M4BDB1   A0A1Q3FTK2   A0A1J1I5W3   A0A1S4EZU7   A0A2K9P5C3   Q7Q663   A0A3B0J9S9   T1PAE6   A0A0L0BLM0   B4JX85   A0A2M4A0I1   A0A2M4A0G3   Q2PT35   B4N211   B4M788   A0A2W1BSZ9   A0A1W4VFK7   A0A2M4BAV8   A0A1I8NGB4   A0A0M3QZ86   A0A1I8PHG3   B4L5Q0   A0A2M4CZ07   A0A1A9WWZ6   A0A1A9WAP8   A0A1B0ALM4   A0A1B0ABZ5   R4IJP6   A0A1A9ULG0   W5JN31   A0A1A9X7T0   A0A2M4CXT4   A0A182I1Q7   R4IJL6   A0A212FDU0   A0A1A9ZQE4   A0A0A1XMM1   A0A1B0BDG6   A0A1A9YJ64   D4Q9H9   B0LL82   A0A1A9UE24   A0A182X776   A0A0K8VAK9   A0A3G2KQA7   A0A034W909   A0A182HFD7   A0A0A1XNH9   W8B2P5  

PDB

4F3L     E-value=1.77958e-14,     Score=194

KEGG

100141429    no KO assigned | (RefSeq) MET1, BmMET1, Met; methoprene-tolerant protein 1

GO

GO:0003677   GO:0046983   GO:0005634   GO:0005737   GO:0005667   GO:0003700   GO:0043069   GO:0035626   GO:0004879   GO:0045944   GO:0046982   GO:0008134   GO:0005500   GO:0006355   GO:0006508   GO:0005524   GO:0006434   GO:0004812   GO:0006418   GO:0009058   GO:0016742   GO:0003824  

Subcellular location

Nucleus  

Length:

514

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.34513

Exp number, first 60 AAs:

0.00057

Total prob of N-in:

0.01658

outside

1  -  514

 

 

Pi

335.746745

Theta

235.947065

Tajima's D

1.284565

CLR

0

CSRT

0.736463176841158

Interpretation

Possibly Positive selection