Gene | Transcription Factor Family | Full Seq Evalue | Best Domain Evalue | Domain Number | Alignment Detail |
---|---|---|---|---|---|
KWMTBOMO04021 | MH1 | 3.8e-39 | 6.5e-39 | 1 | + View |
HMM length of domain: 103 aa c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs. i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. Domain annotation for each sequence: # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to -- ----- ---- -------- -------- ------- ------ ------- ------ --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 132.2 0.3 1.9e-42 6.5e-39 2 103 33 133 Alignments for each domain: == domain 1 score: 132.2 bits; conditional E-value: 1.9e-42 MH1 2 ekavesllkklkkkkeqleellkavesrgkkktkCvliprsldgrlqvaqrkglphvilcrlfrwpdLqsakelkaletceaaeklkkdevCvnPy 97 ++a+esl+kklk+k+++l++l++a++++g++++kCv+i+r+ldgrlqva rkg phvi++r++rwpdL+ ++elk+++ c++a++lk d+vCvnPy KWMTBOMO04021 33 KRAIESLVKKLKEKRDELDSLITAITTNGAHPSKCVTIQRTLDGRLQVAGRKGFPHVIYARIWRWPDLH-KNELKHVKFCQFAFDLKCDSVCVNPY 127 6899****************************************************************6.79************************ PP MH1 98 Hysrve 103 Hy+rv+ KWMTBOMO04021 128 HYERVV 133 ****95 PP |
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