Gene

KWMTBOMO03752

Pre Gene Modal

BGIBMGA010054

Annotation

PREDICTED:_hematopoietically-expressed_homeobox_protein_HHEX_homolog_[Bombyx_mori]

Location

Bomo_Chr7(+):785629-791289      View in EpiBrowser

Transcription factor

Homeobox

Location in the cell

Nuclear   Reliability : 2.569

CDS

ATGTTACGATTTTTATGCTGTCAACTATTGCCCTCGAATTGCTGTAATCCATGGTGGGGTTTGGGGGGGCGGAGGAAAGGTGGCCAGGTTCGGTTCACGGCCGCTCAGACAGGCGCCTTGGAGCGTCGCTTCAACGCCAGCAAGTACCTCAGTCCAGACGAGAGACGAGCTCTCGCTACAACCTTGCGGCTTAGTGACAGACAGGTAAAGACGTGGTTTCAAAACAGGCGCGCCAAGTGGCGTCGCACCACGCCGGACGCAGCCGACGCCGGCAGCCCGCCCACCGCAGACGAGGGTTCCGATGACGAGGTCCACATCGCTGATGACGAATGA

Protein

MLRFLCCQLLPSNCCNPWWGLGGRRKGGQVRFTAAQTGALERRFNASKYLSPDERRALATTLRLSDRQVKTWFQNRRAKWRRTTPDAADAGSPPTADEGSDDEVHIADDE

Uniprot

H9JKK3   A0A2H1VXD5   A0A2H1VWX2   A0A2W1BK56   A0A2A4K7S7   A0A1E1WLL4   + More
A0A437BSN5   A0A194QD25   A0A212FCT1   A0A0T6BGU6   A0A1B0CRJ8   B0W8L0   T1GWX0   A0A182H0F5   A0A182GS41   Q0IFK4   B4M4A6   A0A1S4F8E0   A0A1J1I016   A0A182SXB5   B4NH50   B4R151   A0A182YGF2   A0A1Y9HDP0   A0A182WQK3   Q293K4   B4GM04   B3P2Y7   A0A3B0K5S7   A0A182P2H6   A0A183H7T2   A0A2R2MQC0   A0A182ELX3   A0A158Q6Z8   A0A2K6W0I5   Q4H3E5   A0A1S3JK44   A0A3P8T9J8   A0A1I7V820  

Pubmed

19121390    28756777    26354079    22118469    26483478    17510324    + More
17994087    25244985    15632085    22919073    12203911    12736827    15269171    16141696    25217238   

EMBL

BABH01024666    BABH01024667    BABH01024668    ODYU01005023    SOQ45495.1    ODYU01004942    + More
SOQ45330.1    KZ149996    PZC75419.1    NWSH01000088    PCG79710.1    GDQN01003189    JAT87865.1    RSAL01000013    RVE53423.1    KQ459167    KPJ03443.1    AGBW02009154    OWR51544.1    LJIG01000429    KRT86511.1    AJWK01024855    AJWK01024856    AJWK01024857    AJWK01024858    AJWK01024859    AJWK01024860    AJWK01024861    DS231859    EDS39060.1    CAQQ02138702    CAQQ02138703    CAQQ02138704    JXUM01101244    JXUM01101245    KQ564634    KXJ71984.1    JXUM01083848    JXUM01083849    KQ563400    KXJ73894.1    CH477312    EAT43899.1    CH940652    EDW59467.2    CVRI01000037    CRK93688.1    CH964272    EDW84547.1    CM000364    EDX12138.1    CM000070    EAL29211.2    CH479185    EDW38578.1    CH954181    EDV48301.1    OUUW01000007    SPP83400.1    KZ269985    UZAJ01002399    OZC10618.1    VDO36903.1    UYRW01004219    VDM92345.1    CMVM020000122    AB210477    BAE06482.1    JH712109    EFO16673.2   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053268    UP000007151    UP000092461    + More
UP000002320    UP000015102    UP000069940    UP000249989    UP000008820    UP000008792    UP000183832    UP000075901    UP000007798    UP000000304    UP000076408    UP000075900    UP000075920    UP000001819    UP000008744    UP000008711    UP000268350    UP000075885    UP000050787    UP000085678    UP000077448    UP000271087    UP000050640    UP000024404    UP000265080    UP000095285   

PRIDE

H9JKK3   

Pfam

PF00046   Homeodomain        + More
PF01683   EB

Interpro

IPR017970   Homeobox_CS        + More
IPR001356   Homeobox_dom       
IPR009057   Homeobox-like_sf       
IPR020479   Homeobox_metazoa       
IPR006149   EB_dom       

SUPFAM

SSF46689   SSF46689       

CDD

cd00086  homeodomain

ProteinModelPortal

H9JKK3   A0A2H1VXD5   A0A2H1VWX2   A0A2W1BK56   A0A2A4K7S7   A0A1E1WLL4   + More
A0A437BSN5   A0A194QD25   A0A212FCT1   A0A0T6BGU6   A0A1B0CRJ8   B0W8L0   T1GWX0   A0A182H0F5   A0A182GS41   Q0IFK4   B4M4A6   A0A1S4F8E0   A0A1J1I016   A0A182SXB5   B4NH50   B4R151   A0A182YGF2   A0A1Y9HDP0   A0A182WQK3   Q293K4   B4GM04   B3P2Y7   A0A3B0K5S7   A0A182P2H6   A0A183H7T2   A0A2R2MQC0   A0A182ELX3   A0A158Q6Z8   A0A2K6W0I5   Q4H3E5   A0A1S3JK44   A0A3P8T9J8   A0A1I7V820  

PDB

2E1O     E-value=7.10033e-14,     Score=181

KEGG

105842974    K08024 homeobox protein HEX | (RefSeq) hematopoietically-expressed homeobox protein HHEX homolog

GO

GO:0005634   GO:0043565   GO:0006355   GO:0009744   GO:0030036   GO:0043282   GO:1905905   GO:0042694   GO:0040014   GO:0042755   GO:0006357   GO:0002119   GO:0003677   GO:0005886   GO:0007155   GO:0000049   GO:0004812   GO:0043039   GO:0042555   GO:0048384  

Subcellular location

Nucleus  

Length:

110

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00154

Exp number, first 60 AAs:

0.00154

Total prob of N-in:

0.06048

outside

1  -  110

 

 

Pi

210.160705

Theta

22.212919

Tajima's D

2.770379

CLR

0.527342

CSRT

0.968101594920254

Interpretation

Uncertain