HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	25.4	0.8	2.1e-07	1.2e-05	3	23	57	77
2	31.7	0.3	2e-09	1.2e-07	1	23	83	105
3	28.5	2.0	2.1e-08	1.3e-06	1	23	111	133
4	25.0	1.9	2.7e-07	1.6e-05	1	23	139	161
5	24.2	1.2	4.8e-07	2.8e-05	1	23	167	189

  Alignments for each domain:
  == domain 1  score: 25.4 bits;  conditional E-value: 2.1e-07
                   ETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2  3 CpdCgksFkrksnLkrHirtH 23
                   C +Cgk++ r+s Lk+H+rtH
  KWMTBOMO15776 57 CRICGKTYARPSTLKTHLRTH 77
                   9*******************9 PP

  == domain 2  score: 31.7 bits;  conditional E-value: 2e-09
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    y+C+dC+ksF++  nL++H rtH
  KWMTBOMO15776  83 YRCGDCNKSFSQAANLTAHVRTH 105
                    9*********************9 PP

  == domain 3  score: 28.5 bits;  conditional E-value: 2.1e-08
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    ++Cp+C+++F+++s+ ++H+rtH
  KWMTBOMO15776 111 FRCPICDRRFSQSSSVTTHMRTH 133
                    89********************9 PP

  == domain 4  score: 25.0 bits;  conditional E-value: 2.7e-07
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    y+C  C+k F+++s L++H+r+H
  KWMTBOMO15776 139 YQCRSCKKAFSDSSTLTKHLRIH 161
                    9*********************9 PP

  == domain 5  score: 24.2 bits;  conditional E-value: 4.8e-07
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    y+C+ C  +F+++ nL+rH+r+H
  KWMTBOMO15776 167 YQCKLCLLRFSQSGNLNRHMRVH 189
                    9*********************9 PP