Silkworm Genome Informatics Database

Gene

KWMTBOMO03202

Pre Gene Modal

BGIBMGA013643

Annotation

atonal_[Bombyx_mori]

Location

Bomo_Chr6(-):1421530-1422312 View in EpiBrowser

Transcription factor

bHLH

Location in the cell

Nuclear Reliability : 3.646

CDS

ATGACGGCCGAAACTTACGGGCATCGCTTAGTTTACTCGGAAAAAGATATTTTCTCTAATGACGTCATGTTAGAGTACGCTACAGAAGATTGTTATCTTACGTGGCCAAGATCTCCCGATTCGGGAAGGTCTAGTTTGGAGCCGACACCCTCGATCGATGGAAGCATCAGCCATGACTCTACGCACATCGCCTACCGTGGCCTGTCCAGGGACATGGTGCTAGAAGACAGCGCGGAAGACAACGACTTACTAGAAGGTTCCGGAAAGAGGAGAGGGAGAGCAACCAGCGCAGCTGTCTTGAGGAGACGTCGGTTGGCCGCTAACGCGAGGGAAAGACGAAGAATGCAGAATTTGAACAAAGCATTTGACAGGCTCCGTGGTCACCTTCCGTCTCTAGGAGCTGACCGGCAACTCTCTAAATACGAGACCCTGCAAATGGCTCAGACGTACATAGCCGCCCTTTACGAGCTCCTGCAGTAA

Protein

MTAETYGHRLVYSEKDIFSNDVMLEYATEDCYLTWPRSPDSGRSSLEPTPSIDGSISHDSTHIAYRGLSRDMVLEDSAEDNDLLEGSGKRRGRATSAAVLRRRRLAANARERRRMQNLNKAFDRLRGHLPSLGADRQLSKYETLQMAQTYIAALYELLQ

Uniprot

H6TER9 A0A2H1VM02 A0A2W1C207 A0A2A4J8I8 X2D830 A0A212EY13 + More
A0A0L7KR19 A0A0N0PCN8 A0A194Q2F2 A0A3L8DI77 A0A026WMD2 A0A0J7L7X1 A0A151IC68 A0A151X143 A0A1A9Z9N7 A0A1B0BQ45 A0A1A9XG78 A0A1B0GAV0 A0A1A9UZ06

Pubmed

19121390 28756777 22118469 26227816 26354079 30249741 + More
24508170

EMBL

BABH01032463 HQ888870 ADZ48667.1 ODYU01003282 SOQ41838.1 KZ149911 + More
PZC78143.1 NWSH01002616 PCG67844.1 KC845578 AHJ38847.1 AGBW02011640 OWR46351.1 JTDY01007097 KOB65459.1 KQ460542 KPJ14151.1 KQ459579 KPI99513.1 QOIP01000007 RLU20026.1 KK107152 EZA57222.1 LBMM01000362 KMQ99394.1 KQ978078 KYM97176.1 KQ982588 KYQ54121.1 JXJN01018372 CCAG010010900

Proteomes

UP000005204 UP000218220 UP000007151 UP000037510 UP000053240 UP000053268 + More
UP000279307 UP000053097 UP000036403 UP000078542 UP000075809 UP000092445 UP000092460 UP000092443 UP000092444 UP000078200

PRIDE

H6TER9

Pfam

PF00010 HLH

Interpro

IPR011598   bHLH_dom        + More
IPR036638   HLH_DNA-bd_sf
IPR032661   ATOH1

SUPFAM

SSF47459 SSF47459

Gene 3D

4.10.280.10

CDD

cd00083 HLH

ProteinModelPortal

H6TER9 A0A2H1VM02 A0A2W1C207 A0A2A4J8I8 X2D830 A0A212EY13 + More
A0A0L7KR19 A0A0N0PCN8 A0A194Q2F2 A0A3L8DI77 A0A026WMD2 A0A0J7L7X1 A0A151IC68 A0A151X143 A0A1A9Z9N7 A0A1B0BQ45 A0A1A9XG78 A0A1B0GAV0 A0A1A9UZ06

PDB

2QL2 E-value=0.000731645, Score=96

KEGG

100862826 K09083 atonal protein 1/7 | (RefSeq) atonal

GO

GO:0046983 GO:0007156 GO:0016020 GO:0005886 GO:0007155 GO:0005515 GO:0016021 GO:0045211 GO:0006281 GO:0048384

PANTHER

PTHR19290:SF82

Length:

159

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00138

Exp number, first 60 AAs:

0

Total prob of N-in:

0.20670

outside

1 - 159

Pi

184.679194

Theta

150.652818

Tajima's D

0.6675

CLR

0.136994

CSRT

0.564671766411679

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics