HMM length of domain: 198 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	1.3	0.1	0.07	2.4e+02	13	70	35	103
2	42.2	10.8	1.9e-14	6.5e-11	3	197	125	314

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.07
  TRAM_LAG1_CLN8  13 llstvfglivlsssp..........elwegy....peril.gathfllkayyllalgYfiydllvlllyekkr 70 
                     ++++++gl+v+s+sp          +         p r+  ++++f +++    a++ f+y+l+ ++++   +
   KWMTBOMO02748  35 VMVFLVGLMVQSTSPiaslfislhhN----VsgvePTREApKGEPFTYESGWKDACAVFFYSLVCIVMHAILQ 103
                     56677888888888888777755441....1233433333234455555555557888888888777766555 PP

  == domain 2  score: 42.2 bits;  conditional E-value: 1.9e-14
  TRAM_LAG1_CLN8   3 dervvslvqyllstvfglivlsssp......elwegyperilgathfllkayyllalgYfiydllvlllyekkrkdfvemliHhiitlvllvlsy 91 
                     +e++  +v++l+ +v+g   +  +       +lwegyp +++   +fllk+  +++++Y+++ +  l+++  k++  +   i   +t +++v  +
   KWMTBOMO02748 125 NESGQLIVFHLVTLVWGGDAILREGfifnisQLWEGYPVHPM---SFLLKLWWVVQASYWLHTIPELYFQRIKKD-EWAGRIRNAATAFGFVALA 215
                     7899999**********9888888889988899999998888...67**********************887775.5766666666666666666 PP

  TRAM_LAG1_CLN8  92 v.rnlgrvglvvlllhelsdpflnlrkilsylkkk.skssklvlfngllfllsFfvcRlvllpylillsildvaklslstaplwlpliflilllv 184
                     + +n+ rvg+++ +lh l ++  +  ++   l+++  + + ++l  +l+   +F+++Rl+ l + +l  ++  a        ++  l+ +++l +
   KWMTBOMO02748 216 YgFNFQRVGVCLVVLHALAEFVAHCYRLNTILRGErEDFLDKFL--SLVNGTVFVIVRLFSLVLGVLTFYFGLAG-------VAPLLVRVAALSL 301
                     66***********************9999999999422244455..5*************997765555555554.......6677888888888 PP

  TRAM_LAG1_CLN8 185 LqllnlyWfyliv 197
                     L + ++y++++++
   KWMTBOMO02748 302 LVSFQVYLMFNFI 314
                     9999999999886 PP