Gene | Transcription Factor Family | Full Seq Evalue | Best Domain Evalue | Domain Number | Alignment Detail |
---|---|---|---|---|---|
KWMTBOMO02277 | zf-C2H2 | 3.3e-31 | 1.8e-05 | 12 | + View |
HMM length of domain: 23 aa c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs. i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. Domain annotation for each sequence: # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to -- ----- ---- -------- -------- ------- ------ ------- ------ --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 2.4 0.2 3.9 2.3e+02 1 23 288 310 2 10.7 1.9 0.0091 0.54 2 23 428 450 3 12.0 0.1 0.0036 0.22 1 23 456 478 4 10.5 0.3 0.011 0.64 1 23 486 509 5 22.1 2.9 2.3e-06 0.00014 1 23 514 536 6 20.7 0.2 6e-06 0.00036 1 23 542 564 7 17.1 2.4 8.7e-05 0.0052 1 23 570 592 8 24.8 0.6 3.1e-07 1.8e-05 1 23 598 620 9 10.2 3.6 0.013 0.79 1 23 626 648 10 3.4 0.1 1.9 1.1e+02 1 21 654 674 11 16.1 7.1 0.00018 0.011 1 23 682 704 12 20.5 5.3 7e-06 0.00042 1 23 710 733 Alignments for each domain: == domain 1 score: 2.4 bits; conditional E-value: 3.9 EEETTTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23 y+C C +++ +++H+r H KWMTBOMO02277 288 YQCAACLLALPNRLTFTQHQRDH 310 89999****************99 PP == domain 2 score: 10.7 bits; conditional E-value: 0.0091 EETTTTEEESSHHHHHHHHHC.C CS zf-C2H2 2 kCpdCgksFkrksnLkrHirt.H 23 kC++C+k F++k + +Hi+ H KWMTBOMO02277 428 KCNHCDKLFSSKQSKSVHIKAvH 450 8******************9877 PP == domain 3 score: 12.0 bits; conditional E-value: 0.0036 EEETTTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23 + C++Cg +F + +L H tH KWMTBOMO02277 456 HACGECGARFAYPRSLALHAATH 478 56******************999 PP == domain 4 score: 10.5 bits; conditional E-value: 0.011 EEETTTTEEESSHHHHHHHHHC.C CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23 y C+ Cgk+ +++s+ + H + H KWMTBOMO02277 486 YACDLCGKVLNHPSSVVYHKESeH 509 88*****************98877 PP == domain 5 score: 22.1 bits; conditional E-value: 2.3e-06 EEETTTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23 y+C++Cgk Fk+k +L+rH+ +H KWMTBOMO02277 514 YVCSKCGKNFKHKQLLQRHQLVH 536 9*******************999 PP == domain 6 score: 20.7 bits; conditional E-value: 6e-06 EEETTTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23 + C++C+ Fk+k nL++H+ H KWMTBOMO02277 542 FICKVCNTAFKTKANLVNHQILH 564 78******************999 PP == domain 7 score: 17.1 bits; conditional E-value: 8.7e-05 EEETTTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23 y C++C+++F +k +L+ H+r+H KWMTBOMO02277 570 YACEICKQKFAHKTSLTLHLRRH 592 88********************9 PP == domain 8 score: 24.8 bits; conditional E-value: 3.1e-07 EEETTTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23 ++C+ CgksF++k nL H r+H KWMTBOMO02277 598 FTCNTCGKSFTQKGNLSEHERIH 620 89*******************99 PP == domain 9 score: 10.2 bits; conditional E-value: 0.013 EEETTTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23 +kC C+++F+++s+ + H ++H KWMTBOMO02277 626 FKCALCPRRFTTSSQHRLHVQRH 648 8*******************999 PP == domain 10 score: 3.4 bits; conditional E-value: 1.9 EEETTTTEEESSHHHHHHHHH CS zf-C2H2 1 ykCpdCgksFkrksnLkrHir 21 + C+ C+k+F + + +H r KWMTBOMO02277 654 FACSSCPKRFVSGASRAAHER 674 78********98777777766 PP == domain 11 score: 16.1 bits; conditional E-value: 0.00018 EEETTTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23 + Cp+C ++F+ + L++H+r+H KWMTBOMO02277 682 HSCPHCERTFCERWALTKHMRRH 704 68********************9 PP == domain 12 score: 20.5 bits; conditional E-value: 7e-06 EEETTTTEEESSHHHHHHHHHC.C CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23 ++C++C++ F + snL++H++ H KWMTBOMO02277 710 FRCHHCPRAFADASNLNKHRKHvH 733 89******************9988 PP |
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