Gene | Transcription Factor Family | Full Seq Evalue | Best Domain Evalue | Domain Number | Alignment Detail |
---|---|---|---|---|---|
KWMTBOMO02046 | NGFIB-like | 5.9e-107 | 7.5e-107 | 1 | + View |
HMM length of domain: 261 aa c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs. i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. Domain annotation for each sequence: # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to -- ----- ---- -------- -------- ------- ------ ------- ------ --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 356.5 0.0 4.9e-110 7.5e-107 1 261 239 499 Alignments for each domain: == domain 1 score: 356.5 bits; conditional E-value: 4.9e-110 NGFIB-like 1 sLkGRRGRLpskpksprdesqpspPvsllaalvraivdstpstakldyskfqe.adekvskedaedvqqfydlLtgslevirklaekiPgfselqk 95 sLkGRRGRLpskpk p++ s+pspP+sl++alvra+vd++p+ a+ldys++ e + + ++d e + qfy lLt+s+++i+ +aek+Pg+ +l++ KWMTBOMO02046 239 SLKGRRGRLPSKPKCPQE-SPPSPPISLITALVRAHVDTSPDFANLDYSQYREpSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCP 333 8***************99.**********************************55567899*********************************** PP NGFIB-like 96 aDqelLlesaflelfvlRlayRsknsedkliFcsGlvlhrlqclrgFgewidsivdfsrslqslnldisAfaclaaLvllterhGLkepkrveelq 191 +D e L+ sa lelfvlRlayR++ +++kl Fc+Glvl + qc r+Fg+w++ ++dfs++l+s+ +dis facl+aL+l+t+rhGLkep+rve+lq KWMTBOMO02046 334 EDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQRSFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLITDRHGLKEPHRVEQLQ 429 ************************************************************************************************ PP NGFIB-like 192 skiinaLkdhvsvaagsqnkeaklsrllgkldelralctqgLqrifylkLedLvpaPaiidklfldtlpf 261 +kii +L+ h+ gs + ++++sr+lg+l+elr+l++qgLqrifylkLedLvpaP++i+++f +lpf KWMTBOMO02046 430 MKIIGCLRAHMPGGGGSSSGAPHFSRVLGALPELRSLSVQGLQRIFYLKLEDLVPAPPLIENMFRASLPF 499 ************999*****************************************************99 PP |
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