Gene | Transcription Factor Family | Full Seq Evalue | Best Domain Evalue | Domain Number | Alignment Detail |
---|---|---|---|---|---|
KWMTBOMO02033 | Homeobox | 2.1e-17 | 4.7e-17 | 1 | + View |
HMM length of domain: 57 aa c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs. i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. Domain annotation for each sequence: # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to -- ----- ---- -------- -------- ------- ------ ------- ------ --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 61.5 0.1 2.5e-19 4.7e-17 1 51 173 223 Alignments for each domain: == domain 1 score: 61.5 bits; conditional E-value: 2.5e-19 ST-SSSS-HHHHHHHHHHHHHSSS-SHHHHHHHHHHHTS-HHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeenrypsaeereeLAkklgLeerqVkvWFqNr 51 +r+Rtt+t++qle+L++++ ++++p ++ re+LA+ +gL+ r+V+vWFqNr KWMTBOMO02033 173 KRPRTTITAKQLETLKSAYSSSPKPARHVREQLAHDTGLDMRVVQVWFQNR 223 79************************************************9 PP |
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