Gene

KWMTBOMO06127

Annotation

PREDICTED:_zinc_finger_protein_2_homolog_[Acyrthosiphon_pisum]

Location

Bomo_Chr11(-):795160-796224      View in EpiBrowser

Full name

Zinc finger protein      

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 3.703

CDS

ATGACGCTTCATAATAAGGGTTATGTTTGTAAAGTACGTGATAAAAAAAATACAGAAAAAACCGGCTTAAAAATACATCTAAATAAACCTTACAGTTGTGACGTGTGTGATAAAAGTTTTACATATAAAAGTGACTTAGAGAGACATCTAAGAATACACACCGGAGAAAAAAAACCTTACAGTTGTGACGTGTGTGATAAAAGTTTTACACAAAATGGTCATTTGAAGGAACATCTAAGAATACATACCGGAGAAAAACCTTACAGTTGTGAAGTATGTGATAAAAGTTTTACACGAAAAAGTAACTTTGAGAGACATCTAAGAATACATACCGGAGAAAAAAAACCTTACAGTTGTGACGTGTGTGATAAAAGTTTTACACAAAATGGTCATTTGAAGGAACATCTAAGAATACATACCGGAGAAAAACCTTACAGTTGTGACGTGTGTGATAAAAGTTTTACACGTAAAACTTCCTTGAACATACATCTAAGAATACATACCGGAGAAAAACCTCCCAGTTGTGAGGTGTGTGATAAAAGTTTTACACAAAAAGGTTATTTGAAGGAACATCTAAGAATACATACCGGAGAAAAACCTTACAGTTGTGAAGTGTGTGATAAAAGTTTTACACATAAAAGTAACTTAAAGGGACATCTAAGAATACATACCGGAGAAAAACCTTACACTTGTGAAGTGTGTGATAAAAGTTTTACACATAAAATTTCCTTGAACATACATCTAAGAATACATACCGGAGAAAAAAAACCTTACAGTTGTGAGGTGTGTGATAAAAGTTTTACACAAAAAAATACCTTAAAGAGACATGTAAAAATACATACCGGAGAAAAACCTTACAGTCGTGACGTGTGTGACAAAAGTTTTACCCGCAAAGGCATCTTAAAAAATCATCTCGGAACACATCAAAAGAAAACCATGTAA

Protein

MTLHNKGYVCKVRDKKNTEKTGLKIHLNKPYSCDVCDKSFTYKSDLERHLRIHTGEKKPYSCDVCDKSFTQNGHLKEHLRIHTGEKPYSCEVCDKSFTRKSNFERHLRIHTGEKKPYSCDVCDKSFTQNGHLKEHLRIHTGEKPYSCDVCDKSFTRKTSLNIHLRIHTGEKPPSCEVCDKSFTQKGYLKEHLRIHTGEKPYSCEVCDKSFTHKSNLKGHLRIHTGEKPYTCEVCDKSFTHKISLNIHLRIHTGEKKPYSCEVCDKSFTQKNTLKRHVKIHTGEKPYSRDVCDKSFTRKGILKNHLGTHQKKTM

Uniprot

J9JLS6   J9JJ22   J9K3N2   A0A087T3M8   J9JMS6   J9JRV9   + More
A0A087U241   X1WUX7   H2YQC6   X1XR32   J9JZ45   H2ZH56   H2YQC4   J9K8W0   X1XFU6   X1XP18   V4AAN6   J9JQB7   J9K2A4   A0A067QID4   A0A087UF07   J9JWR5   J9JNC1   X1WX70   X1WP87   J9JK94   X1XQ08   A0A087U2Y4   J9JJH7   X1WQB0   A0A2I4CPG1   X1XNT2   R7V818   A0A087T3V7   A0A2I4CLZ4   V4A119   J9JT52   A0A2P6K6Q8   A0A087TDG0   A0A3Q1M710   A0A087UQQ9   A0A1S3R590   X1WW20   X1X3A5   J9JNF5   H9IWP8   X1X4B1   A0A3P9KK51   J9JSS0   A0A087TG17   A0A087U5I9   X1XG92   A0A3N0YJN1   A0A0F8BL91   A0A067R6D9   A0A087UEU2   H2YQC8   A0A3B3ZAY0   H2LRY0   A0A3S2N494   A0A087TG18   V4ANB0   J9K4V2   V3ZWK1   J9K1Q9   A0A087TE42   J9LSF0   A0A087UKY1   A0A146TIS1   X1XNR3   J9K0J4   A0A3S2NGX4   A0A087UHT5   A0A087V1G4   A0A3Q2E8A1   A0A0L8FPL7   J9L823   A0A3Q2E350   J9K2S7   A0A3P9HZE8   A0A3Q1BS83   A0A3B3TWS1   A0A1S3R1Z6   A0A0L8HV14   Q8R1N3   B1ASD8   A0A087U2Y9   A0A087TVT7   A0A3Q1B9J2   A0A067QT53   A0A3B3HYW7   A0A3N0YSU6   A0A087TGP0   A0A146SLS6   A0A3P9JBI4   A0A3P9L4Z7   A0A2P6KH06   A0A087TG20   A0A087TEZ5   A0A3Q1B9H9  

EC Number

2.1.1.-

Pubmed

23254933    24845553    19393038    19121390    17554307    25835551    + More
25463417    15489334    19468303   

EMBL

ABLF02009504    ABLF02033404    ABLF02030560    ABLF02030568    KK113255    KFM59717.1    + More
ABLF02038601    ABLF02009506    KK117791    KFM71430.1    ABLF02025523    ABLF02020429    ABLF02009642    ABLF02022170    ABLF02017959    ABLF02024899    KB202444    ESO90341.1    ABLF02020710    ABLF02032781    ABLF02047065    ABLF02063720    ABLF02032783    ABLF02032786    KK869201    KDR08556.1    KK119529    KFM75946.1    ABLF02038588    ABLF02038606    ABLF02038607    ABLF02025528    ABLF02038592    ABLF02029797    ABLF02022486    ABLF02022489    ABLF02022496    ABLF02022497    ABLF02022499    ABLF02022500    ABLF02063679    ABLF02020406    KK117904    KFM71723.1    ABLF02005500    ABLF02005501    ABLF02009116    ABLF02009117    ABLF02009118    ABLF02009119    ABLF02060218    ABLF02063036    ABLF02066102    ABLF02066235    ABLF02024472    ABLF02003804    ABLF02003805    ABLF02003807    ABLF02004643    ABLF02004644    AMQN01038589    KB294404    ELU14642.1    KK113279    KFM59796.1    KB202954    ESO86981.1    ABLF02015139    ABLF02034952    ABLF02034961    MWRG01023322    PRD22014.1    KK114724    KFM63149.1    KK121079    KFM79698.1    ABLF02029788    ABLF02017379    ABLF02017382    ABLF02040395    BABH01021050    ABLF02012480    ABLF02025261    KK115050    KFM64056.1    KK118282    KFM72628.1    ABLF02021718    RJVU01038001    ROL46429.1    KQ042692    KKF11497.1    KK852669    KDR18850.1    KK119509    KFM75881.1    RSAL01000931    RVE41044.1    KFM64057.1    KB201224    ESO98647.1    ABLF02014787    ESO86980.1    ABLF02011913    KK114808    KFM63381.1    ABLF02006076    ABLF02013581    ABLF02013584    KK120315    KFM78020.1    GCES01093557    JAQ92765.1    ABLF02000879    ABLF02030153    RSAL01000042    RVE50774.1    KK119857    KFM76924.1    KL822972    KFM83453.1    KQ428204    KOF66345.1    ABLF02009695    ABLF02018750    ABLF02061073    ABLF02063523    ABLF02009698    ABLF02018747    KQ417236    KOF93063.1    AL731663    BC024323    AAH24323.2    AL627077    BX936357    KFM71728.1    KK116981    KFM69226.1    KK852968    KDR13126.1    RJVU01026598    ROL49272.1    KK115149    KFM64279.1    GCES01104763    JAQ81559.1    MWRG01012199    PRD25597.1    KK115052    KFM64059.1    KK114908    KFM63684.1   

Proteomes

UP000007819    UP000054359    UP000007875    UP000030746    UP000027135    UP000192220    + More
UP000014760    UP000009136    UP000087266    UP000005204    UP000265180    UP000261520    UP000001038    UP000283053    UP000265020    UP000053454    UP000265200    UP000257160    UP000261500    UP000000589   

PRIDE

H9IWP8    B1ASD8   

Pfam

PF00096   zf-C2H2        + More
PF14291   DUF4371
PF12171   zf-C2H2_jaz
PF07776   zf-AD
PF05914   RIB43A
PF01352   KRAB

Interpro

IPR036236   Znf_C2H2_sf        + More
IPR013087   Znf_C2H2_type       
IPR017114   YY-1-like       
IPR017125   Znf_PRDM5-like       
IPR017126   Znf_PRDM12       
IPR025398   DUF4371       
IPR011017   TRASH_dom       
IPR003656   Znf_BED       
IPR022755   Znf_C2H2_jaz       
IPR039705   REPIN1       
IPR012934   Znf_AD       
IPR008805   RIB43A       
IPR036051   KRAB_dom_sf       
IPR001909   KRAB       

SUPFAM

SSF57667   SSF57667        + More
SSF109640   SSF109640       

CDD

cd07765  KRAB_A-box

ProteinModelPortal

J9JLS6   J9JJ22   J9K3N2   A0A087T3M8   J9JMS6   J9JRV9   + More
A0A087U241   X1WUX7   H2YQC6   X1XR32   J9JZ45   H2ZH56   H2YQC4   J9K8W0   X1XFU6   X1XP18   V4AAN6   J9JQB7   J9K2A4   A0A067QID4   A0A087UF07   J9JWR5   J9JNC1   X1WX70   X1WP87   J9JK94   X1XQ08   A0A087U2Y4   J9JJH7   X1WQB0   A0A2I4CPG1   X1XNT2   R7V818   A0A087T3V7   A0A2I4CLZ4   V4A119   J9JT52   A0A2P6K6Q8   A0A087TDG0   A0A3Q1M710   A0A087UQQ9   A0A1S3R590   X1WW20   X1X3A5   J9JNF5   H9IWP8   X1X4B1   A0A3P9KK51   J9JSS0   A0A087TG17   A0A087U5I9   X1XG92   A0A3N0YJN1   A0A0F8BL91   A0A067R6D9   A0A087UEU2   H2YQC8   A0A3B3ZAY0   H2LRY0   A0A3S2N494   A0A087TG18   V4ANB0   J9K4V2   V3ZWK1   J9K1Q9   A0A087TE42   J9LSF0   A0A087UKY1   A0A146TIS1   X1XNR3   J9K0J4   A0A3S2NGX4   A0A087UHT5   A0A087V1G4   A0A3Q2E8A1   A0A0L8FPL7   J9L823   A0A3Q2E350   J9K2S7   A0A3P9HZE8   A0A3Q1BS83   A0A3B3TWS1   A0A1S3R1Z6   A0A0L8HV14   Q8R1N3   B1ASD8   A0A087U2Y9   A0A087TVT7   A0A3Q1B9J2   A0A067QT53   A0A3B3HYW7   A0A3N0YSU6   A0A087TGP0   A0A146SLS6   A0A3P9JBI4   A0A3P9L4Z7   A0A2P6KH06   A0A087TG20   A0A087TEZ5   A0A3Q1B9H9  

PDB

5WJQ     E-value=4.26047e-49,     Score=490

KEGG

101737616    no KO assigned | (RefSeq) zinc finger protein 468-like

GO

GO:0003676   GO:0005634   GO:0046872   GO:0000976   GO:1900111   GO:0003677   GO:0016021   GO:0006355   GO:0006351   GO:0030246   GO:0004559   GO:0006013   GO:0015923   GO:0006260  

PANTHER

PTHR24406:SF10  

Length:

313

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.07804

outside

1  -  313

 

 

Pi

140.142079

Theta

150.577974

Tajima's D

0.013203

CLR

0

CSRT

0.375431228438578

Interpretation

Uncertain