HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	4.1	1.6	1.2	69	1	21	40	60
2	21.1	0.9	4.6e-06	0.00028	1	23	361	383
3	19.9	1.7	1.1e-05	0.00067	1	23	389	411
4	11.5	1.8	0.0052	0.31	2	23	668	689
5	21.5	1.2	3.4e-06	0.00021	1	23	695	717
6	20.7	1.8	6.1e-06	0.00036	3	23	801	821
7	24.0	0.4	5.6e-07	3.4e-05	1	23	827	849

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 1.2
                   EEETTTTEEESSHHHHHHHHH CS
        zf-C2H2  1 ykCpdCgksFkrksnLkrHir 21
                   + Cp C + F + +++  H r
  KWMTBOMO02012 40 HMCPRCQEQFESLHEFLYHKR 60
                   67*****************88 PP

  == domain 2  score: 21.1 bits;  conditional E-value: 4.6e-06
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    ++C +Cgk+F + s L+ Hir+H
  KWMTBOMO02012 361 HRCRYCGKVFGSDSALQIHIRSH 383
                    79********************9 PP

  == domain 3  score: 19.9 bits;  conditional E-value: 1.1e-05
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    +kC++Cg +F++k nLk+H ++H
  KWMTBOMO02012 389 FKCNVCGSRFTTKGNLKVHFQRH 411
                    8********************99 PP

  == domain 4  score: 11.5 bits;  conditional E-value: 0.0052
                    EETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   2 kCpdCgksFkrksnLkrHirtH 23 
                    +C++C k+F  +s L+ H+r+H
  KWMTBOMO02012 668 TCSICYKTFACNSALEIHYRSH 689
                    7********************9 PP

  == domain 5  score: 21.5 bits;  conditional E-value: 3.4e-06
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    +kC++C + F++k n+k+H+ tH
  KWMTBOMO02012 695 FKCTVCERGFSTKGNMKQHMLTH 717
                    8*********************9 PP

  == domain 6  score: 20.7 bits;  conditional E-value: 6.1e-06
                    ETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   3 CpdCgksFkrksnLkrHirtH 23 
                    C++C k F+++s L+ H+rtH
  KWMTBOMO02012 801 CGVCRKNFSSSSALQIHMRTH 821
                    ********************9 PP

  == domain 7  score: 24.0 bits;  conditional E-value: 5.6e-07
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    ++C +C k F++k nLk+H+ tH
  KWMTBOMO02012 827 FRCAVCQKAFTTKGNLKVHMGTH 849
                    89******************999 PP