Silkworm Genome Informatics Database

Gene

KWMTBOMO02012

Pre Gene Modal

BGIBMGA002946

Annotation

PREDICTED:_homeotic_protein_spalt-major-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr4(+):10175676-10202009 View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear Reliability : 4.038

CDS

ATGCCGCGCGTTAAGCCAGCCTGCGTCCGCCGCGTCTCCATCGGTGAAAGTTCCGGGTCGTGTTCAGAAGATGACATCCATCATGGTACGGACGAGGCGAGAGATAGACCGGAGGCCCACATGTGCCCAAGGTGTCAGGAACAGTTCGAGAGCTTGCACGAGTTCCTCTACCACAAACGCGTTTGCGATGAAAAAGCAATGCAGATGGGTGAGGAAAGAATGCACTCCGACCCCGAAGAAATGGTTGTATCCGGCGACGAGGAGATGGACGGTCCCAATAAACAATTAGATCAGGTGCGACGACATCGACAAGATGCCGAGAATAACAACAGCCTCGAGGACGGCGAAGCGGAGGTACCGGAAGCGGACGTTCCGCCGGTCGGGCTACCTTTCCCAGTCGCCGGCCACGTCACACTCGAAGCCCTGCAAAACACTAAAGTCGCTGTAGCACAGTTTGCCGCGACGGCCTTGGCCAATAACACTGACAATGAAGCTGCATTACATGAACTGGCCGTTTTACAAAGCACACTTTTTACATTACAACACCAACAAGTGTTTCAGTTACAACTTATACGTCAACTTCAAAATCAGCTTTCGCTTACACGACGAAAAGAAGACCACCAATCAAGCCCACCGCCGAGCGAACCGGAGCCGGTTGCGCCTGTGCCTATCGCTCGATCACCGTCGCCGCCTCGTCCCCCAAGGGAGCCAACTCCTGCAGCACCCACTCCCCCCGCTAGTCAGAACCTACCCTCCACTCATTCGCACCTAACACCAAAATCGGAACCAATCTCTGTTCCAAAAATTCCAACCTCGTCTCCGTCAATGATGACACACCCGCCTTATAGCTCCATATCTTCATCGTTAGCTTCTACTATCATTACAAATAACGATCCGCCGCCGTCTCTCAATGAACCTAACACACTGGAAATGTTACAAAAAAGAGCGCAAGAAGTTTTAGACAATGCATCGCAAGGTTTGTTGGCAAATAATCTTGCTGACGAATTAGCCTTCCGGAAATCGGGCAAGATGTCGCCATACGACGGAAAATCGGGAGGACGTAACGAACCATTCTTCAAGCATCGCTGTCGATATTGCGGAAAAGTTTTTGGAAGCGATTCTGCCCTACAAATTCACATCAGATCTCATACAGGTGAACGACCTTTCAAATGCAACGTATGTGGATCACGATTTACTACCAAAGGAAATTTAAAAGTGCATTTTCAAAGACATACCGCTAAGTTTCCACACGTGAAGATGAATCCCAATCCTGTACCGGAGCATTTGGACAAGTATCATCCACCTCTATTAGCACAATTGTCACCGGGACCCATTCCCGGCATGCCGCCCCACCCACTACAGTTTCCTCCGGGTGCACCGGCCCCTTTCCCGCCAAGCTTGCCACTATATAGACCATCACATCATGATTTACTTCCGCCTCGCCCACTTAGTGACAAACCTCTGCCTCCGCACCCACTCTTTGCAATGCGGGAAGAACAAGATGCTCCTGCAGATCTTAGCAAACCATCTGCACCGAGTCCCGCTCGATCAGCGCAAGATTTATTTAAATGTGAACCTCAAGATGAGGAGAGTCAACGAGATTCTAGTTTTGAAGAAGCTGACCGTGTGTCTCCGAAACGTGAACCCGAGGAAACTGATTTGGCACAAGAAACGGAACAAGATCGGTATCCATCGACCTCACCTTACGATGACTGCAGCATGGACTCAAAGTATAGCAACGAAGATCAAATCGGCAGAGAGAGTCCGCATGTGAAGCCGGACCCCGACCAACCGGAAAATCTCTCAAGTTCGGAGAGTGGGCGGAGTGCGAGGACTTCTCCGCCGTCTCCAACGATGTCTACGCCATCAACGCCGCCGAGACTGCCGCATCACTCGCCGCTGCCGTCACCGCCAACACCTCTCGCTGCGCTCGGTGCTCTCGGAGGATCTCCCTTCAGCCCACTCGGACTCGCGTTTCCTCCCGCAGTGCGTGGCAATACTACGTGTAGCATCTGCTACAAGACATTCGCCTGCAACTCTGCGCTCGAAATACATTACCGCAGCCACACTAAAGAACGTCCCTTCAAGTGCACCGTATGTGAACGCGGATTTTCCACTAAGGGCAATATGAAGCAACACATGCTAACGCACAAGATCCGCGACATGCCGCCCGGCTTCGATAAGAATGTCGTCGGGGCGCCCTCTAGCGAGGATGGGCGGGATCAGAGTCCAGAACGGCGGTCGCCCGAAAAACTGGACCTGAAACGCTCTCCGCCTGTACACGTGCCACCGCCTATGAACCACACACCATCCATCGACATGCCGCCTTTACCGAAACGGCCCAGTGTTCCTAGCGGACCGCCACATCCACCACCGCAGCAGACATCATCCAAGCATTTATGCGGGGTGTGCCGCAAGAACTTCTCTTCGTCGTCAGCGTTACAAATCCACATGAGGACACACACCGGAGACAAGCCCTTTAGATGTGCTGTCTGCCAGAAGGCATTCACTACTAAAGGAAACCTCAAGGTGCACATGGGCACTCACATGTGGAGCGGCGGCGCTTCTCGTCGCGGTCGGCGAATGTCTCTGGAGCTGCCCCCGCGGCCGCTGCACGAGCCCCACGACCTGCTGCGGCGACCGGACCTATTCTACCCGTACCTGCCTGCGCCCTTCCTCAACGGCATGCAGCAAAAGCTGAACGAAATATCAGTGATACAACAGAACGCGGGTCAAAACGGCGTAGCTGGAAAATTTCCAGGTCTACTGGGCTTCGGTCCTTTCGGCGCCGCTCGCCCTGGAGCGGCTTCTCCCCTGGAGAGACCGCCCTCACTAGAAGGCGGTGACGAGAGACAAGCGGCGATGCGAGAGCTGGCCGAACGCGGACGCGAACTAGCCGAACGCAGTCGGCAAATGCGCGAAGAGGGGGAGTACAGGTCGTCGAGCAGTCACGGGGCACACGCTCCCCCGGTGGCGCAGACCTCGCCCCCCGCGCCGCACCACCCTCACCCCCTCGCCTCGCTGCCGCCGCCGGCGCGCACCGAAGGTCTTACGGTTTAA

Protein

MPRVKPACVRRVSIGESSGSCSEDDIHHGTDEARDRPEAHMCPRCQEQFESLHEFLYHKRVCDEKAMQMGEERMHSDPEEMVVSGDEEMDGPNKQLDQVRRHRQDAENNNSLEDGEAEVPEADVPPVGLPFPVAGHVTLEALQNTKVAVAQFAATALANNTDNEAALHELAVLQSTLFTLQHQQVFQLQLIRQLQNQLSLTRRKEDHQSSPPPSEPEPVAPVPIARSPSPPRPPREPTPAAPTPPASQNLPSTHSHLTPKSEPISVPKIPTSSPSMMTHPPYSSISSSLASTIITNNDPPPSLNEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRKSGKMSPYDGKSGGRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHVKMNPNPVPEHLDKYHPPLLAQLSPGPIPGMPPHPLQFPPGAPAPFPPSLPLYRPSHHDLLPPRPLSDKPLPPHPLFAMREEQDAPADLSKPSAPSPARSAQDLFKCEPQDEESQRDSSFEEADRVSPKREPEETDLAQETEQDRYPSTSPYDDCSMDSKYSNEDQIGRESPHVKPDPDQPENLSSSESGRSARTSPPSPTMSTPSTPPRLPHHSPLPSPPTPLAALGALGGSPFSPLGLAFPPAVRGNTTCSICYKTFACNSALEIHYRSHTKERPFKCTVCERGFSTKGNMKQHMLTHKIRDMPPGFDKNVVGAPSSEDGRDQSPERRSPEKLDLKRSPPVHVPPPMNHTPSIDMPPLPKRPSVPSGPPHPPPQQTSSKHLCGVCRKNFSSSSALQIHMRTHTGDKPFRCAVCQKAFTTKGNLKVHMGTHMWSGGASRRGRRMSLELPPRPLHEPHDLLRRPDLFYPYLPAPFLNGMQQKLNEISVIQQNAGQNGVAGKFPGLLGFGPFGAARPGAASPLERPPSLEGGDERQAAMRELAERGRELAERSRQMREEGEYRSSSSHGAHAPPVAQTSPPAPHHPHPLASLPPPARTEGLTV

Uniprot

NA

ProteinModelPortal

NA

PDB

2MA7 E-value=2.3987e-09, Score=153

KEGG

101745629 K19871 sal-like protein | (RefSeq) homeotic protein spalt-major-like

GO

GO:0003676 GO:0046872 GO:0005840 GO:0006412 GO:0005634 GO:0005737 GO:0016876 GO:0043039 GO:0004651

Length:

1019

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.003

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00003

outside

1 - 1019

Pi

228.091846

Theta

173.866388

Tajima's D

1.151009

CLR

0.461915

CSRT

0.706214689265537

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics