HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	19.0	1.7	2.1e-05	0.0013	1	23	225	249
2	20.8	0.8	5.8e-06	0.00035	1	23	255	279
3	19.7	3.5	1.3e-05	0.00077	1	23	285	307

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 2.1e-05
                    EEET..TTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCp..dCgksFkrksnLkrHirtH 23 
                    y+C+  +Cgk +  +s+Lk+H rtH
  KWMTBOMO01705 225 YECSypGCGKNYFKSSHLKAHARTH 249
                    89**********************9 PP

  == domain 2  score: 20.8 bits;  conditional E-value: 5.8e-06
                    EEET..TTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCp..dCgksFkrksnLkrHirtH 23 
                    ++C   +C ++F+r+++L rH rtH
  KWMTBOMO01705 255 FRCAwpGCERRFSRSDELSRHKRTH 279
                    899999******************9 PP

  == domain 3  score: 19.7 bits;  conditional E-value: 1.3e-05
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    ++C +C+++F r+++L +H ++H
  KWMTBOMO01705 285 FECRVCNRRFMRSDHLAKHVKRH 307
                    89********************9 PP