SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01705
Pre Gene Modal
BGIBMGA006120
Annotation
PREDICTED:_Krueppel-like_factor_10_[Amyelois_transitella]
Transcription factor
Location in the cell
Nuclear   Reliability : 2.736
 

Sequence

CDS
ATGTCCACTCTGCTCGAAGTTTGCGGACCCCTCTCACCGCCGTCAACGCCGCCGTTGATGGAAAATAAAGTCGAGCTGCCTCTCAAAAAGATTGCCGCAAAACGGGCGAGAGAGTCGTCGTCGCCGCCCGCCGGCCTGGTCACGCCCCAGCCCTCGGACTCTGAAGGAGAAGACGAGTTCAGCAAGCGATCCCGATGCGAGCTGGAGCGCTTGCTTCTCACGACGCCGCCCCCGGAGCCGTGCTACAGGCCCTCGGTCATCATGCGGGCCCACAAGGACGGCACCTGCAGTCCGGAGCCTCTGCCGCCCCCGCCCGCGCACGGCATGAACATGCTCAAGACACTTAAATTTAAAATGAACCGAGGACACAGTTATTCACAAACCAAATACATTGCGAGCCAAACGTCTCCTCCCGTTCCGGTCGCCGTTCAACCTCCCAGTCCCCCACCGAAGATTGAAGAAGCTCGCGTACCGTCACCCCACCTGGAATGTCAACCGAAACAAAACACGAGAGACGAACAGCGCGTCCCCCAGGCCCCGTCGCCGGCCGCCACCCCGGGCTGGGTCCCGCTGGCGCCGAGACCGGCTCCGGCGGTCCTAGTCCCGGGGGCGCTGCTGCCCACCGCGGCGCTGTGGCTCGTGGCGCCCGCGCCCGCCGCCCGGCGCCGACTCTACGAGTGCTCGTATCCCGGATGCGGGAAAAATTACTTTAAGTCGTCACACCTGAAAGCGCACGCCCGCACGCACACCGGGGAGCGACCGTTCCGGTGCGCGTGGCCCGGCTGCGAGCGGAGGTTCTCGCGCTCCGACGAGCTGTCCCGGCACAAGCGCACGCACACCGGCGAGAAGAAGTTCGAGTGCCGCGTGTGTAACCGCCGCTTCATGCGCTCCGACCACCTCGCTAAGCACGTCAAGAGGCACGCCAAAGAGAAGGCGCCGCTGACCCCGGTGCTGCGGCTCCTCCCGTCTCCTCCCGTGGCGCTCCCGGTGCGGCCCGTGGTGGCGGCGGCGCAGTGA
Protein
MSTLLEVCGPLSPPSTPPLMENKVELPLKKIAAKRARESSSPPAGLVTPQPSDSEGEDEFSKRSRCELERLLLTTPPPEPCYRPSVIMRAHKDGTCSPEPLPPPPAHGMNMLKTLKFKMNRGHSYSQTKYIASQTSPPVPVAVQPPSPPPKIEEARVPSPHLECQPKQNTRDEQRVPQAPSPAATPGWVPLAPRPAPAVLVPGALLPTAALWLVAPAPAARRRLYECSYPGCGKNYFKSSHLKAHARTHTGERPFRCAWPGCERRFSRSDELSRHKRTHTGEKKFECRVCNRRFMRSDHLAKHVKRHAKEKAPLTPVLRLLPSPPVALPVRPVVAAAQ

Summary

Pfam
PF00096   zf-C2H2
Interpro
IPR036236   Znf_C2H2_sf        + More
IPR013087   Znf_C2H2_type       
SUPFAM
SSF57667   SSF57667       
PDB
2EBT     E-value=2.13561e-26,     Score=295

Ontologies

Topology

Length:
338
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
2.14945
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00472
outside
1  -  338
 
 

Population Genetic Test Statistics

Pi
213.125752
Theta
196.467771
Tajima's D
0.19057
CLR
0.145659
CSRT
0.420178991050447
Interpretation
Uncertain
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