HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	3.9	0.5	1.3	80	5	22	595	612
2	18.2	0.5	3.8e-05	0.0023	1	23	619	641
3	8.2	1.5	0.06	3.6	2	23	648	669
4	17.2	2.4	8.3e-05	0.005	1	23	675	697
5	17.6	1.8	5.8e-05	0.0035	1	23	703	726

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 1.3
                    TTTEEESSHHHHHHHHHC CS
        zf-C2H2   5 dCgksFkrksnLkrHirt 22 
                    +C  + k+  nL +H+  
  KWMTBOMO01444 595 ICEICGKHTRNLASHLDA 612
                    466666666777777655 PP

  == domain 2  score: 18.2 bits;  conditional E-value: 3.8e-05
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    y C++C+k+Fk ks L  H+ +H
  KWMTBOMO01444 619 YSCDVCDKKFKFKSGLLIHRAVH 641
                    89******************999 PP

  == domain 3  score: 8.2 bits;  conditional E-value: 0.06
                    EETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   2 kCpdCgksFkrksnLkrHirtH 23 
                    +C++Cgk+F    ++++H   H
  KWMTBOMO01444 648 TCEVCGKTFHILAQYRKHFVYH 669
                    7****************97655 PP

  == domain 4  score: 17.2 bits;  conditional E-value: 8.3e-05
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    ++C+ Cgk+F++++ Lk+H r+H
  KWMTBOMO01444 675 FECHTCGKRFNTNDILKVHSRMH 697
                    89*******************99 PP

  == domain 5  score: 17.6 bits;  conditional E-value: 5.8e-05
                    EEETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirt.H 23 
                    + C +Cgk+F++     rH+r+ H
  KWMTBOMO01444 703 FSCQECGKTFRTAGCVSRHRRIvH 726
                    89*******************999 PP