SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01444
Pre Gene Modal
BGIBMGA008948
Annotation
PREDICTED:_uncharacterized_protein_LOC101745004_[Bombyx_mori]
Transcription factor
Location in the cell
Nuclear   Reliability : 4.369
 

Sequence

CDS
ATGGCAGAGAAAACTTTTGTTTGGACTCCAAAGCGTACACACAGATTTTTAGAACTGCGGTTTCAAAATGATTGGCTGTTTAAAAAAAAGAAGCAGCCGTGGGCAGAATTTAGGGAAATAATGCTGCAGGATGGCTTCCCTGAAGAAATGAGCGTTAAACACATAAGAAAAAAGTGGGGCTATACATATGATATGTATAGAATAGCTAAAAGAAATAAAAATAAAGTATGGAAATATTACAAGATCTTTGATAAAAATTTCTCTACATCTAAGACGCTAGATAAATATGATTCATGGAGTGATGAATGGCGTTTGAAACTGGTAACATGTATTAGTGAAACAAAGGGATTGAAATTGGATTTCCATACTATGTGGCGTACCATAGAAAAAGCAATGAGATGCCAGGATTTACCTTTAGACTGTTGTATACAGGACATGAAAGGACTTTGGCAACACATACGTGTGACATTTAATAGGAAACATCGACAAAAACTGAAGAAGGGAGCGGAGTTCACGGAGTGGCCTTTGTATGATGTGATACAAAGGGACTCTATGAAGTACCGGAAGAAACGAAAGGGCGCCAACACTGATGACAATGATAATGAAAATGAATTTCATTGGTCTAAACACATAACGGAATCGTTTATACAGATTAGGCTGCAAAACGACTGGTTGTTCAGAGAGAGGAAATGCGCGTGGAGTGAGCTTCTAAAAATAATGCTGAACGAGTACGGGTTCCCGGCGACTTTGACGTCGAGAGAAATATGTCGCAAATGGGCGTCCATGTTCTCAGAGTACCAAAAAGCGAGAGCCACAAATAACAAGCTATGGGTTTATTATAATTTATTCGAATTGTATTTGGGAGACGGAAATTTAAGTCTGAATCCGCTTTTGGGCTGGCAAGAAGAGTGGGTGTTTAATTTGATAAATGCCAGAATAGACTTGGAGAAATCATTTCAGAATTACTCGAAGCATCCCGTCAAAGCTTGGAGAGAAGTTGAGAAACGGTTGAGGAGCATGGGGCTGCCTGCAGACCACAGCGTCCTCGACCTGCCGGAGATATGGAAGCACTTACTCAATACGTTCAAGTGGAAAAAGAAATTTGCGGAAAAAGGTATACTGAACGAGCAGTGGCCTTATTACGACGCAATGGCTCGCTTCGACGATATCAGAGAGAAACGGCCAATTAACAAGCACAAAGAAGAAATACATTCCGACGAGGGTGACCACAATGTAGACGACCACGAAGACGACATTAAACTGTTCGATTTGAAACGGAGGCTCGAATTCAAGCCGAAGAATGAGTTTGGGAACCATTGCAGGGCCTGCCTCACCGAGGACGGCAGCGTCGACATATACGAACGGAAAGACGACAACGGATTTGACTTGGCGTTCAAACTGAAGGCCGTTGGCGGGATCGAGGTCGAAAGAACCGATCAGCTACCGTCGCAAATATGTTACAATTGCCTCCAGGAGTTGGAAAACGCCTTTAAGTTCAGATTGAAGTGTAGAAGCACGGATAAGCAGTTGAGGATTACGGTCATCAAGAAGGAAATACTGCAGAACTCTGAGGAGTATCGCGTCGACGATAACGATATGGGCGGGCGTGACGTCAGCGACTGCGACGACACCAAAGGCGACCTGGACGGCGGCGAGGCCAGCGTCGCCTTCGACATGTTCCCCTCCAACCGGACGAAGACGAAAACCATCCTGAAAAAAGAGAGGAAGATGATCAGGAAAAAGAAGATTCGCAAATTAAGAAAGACGTACGATTACAGCAAGATCTGCGAGATATGCGGGAAGCACACGAGGAACCTCGCCAGCCACCTCGACGCGCACAACGTCGGCAAGAAGTACTCGTGCGACGTATGCGACAAGAAGTTCAAGTTCAAGAGCGGGCTCCTGATACACCGCGCGGTCCACGACCCGACGCCGAAGAAGACTTGCGAGGTCTGCGGGAAGACGTTCCACATACTGGCCCAGTACCGGAAGCACTTCGTGTACCACGCGAACGAGAGGAAGTTCGAGTGTCACACGTGCGGGAAGCGGTTCAACACGAACGACATCCTGAAGGTGCACAGCCGGATGCACACGGACGAGAGGCCGTTCAGCTGCCAGGAGTGCGGCAAGACGTTCCGGACGGCGGGCTGCGTGAGCCGCCACCGCCGGATCGTGCACCGGAACGTCAAACAGAAACCTAAATAA
Protein
MAEKTFVWTPKRTHRFLELRFQNDWLFKKKKQPWAEFREIMLQDGFPEEMSVKHIRKKWGYTYDMYRIAKRNKNKVWKYYKIFDKNFSTSKTLDKYDSWSDEWRLKLVTCISETKGLKLDFHTMWRTIEKAMRCQDLPLDCCIQDMKGLWQHIRVTFNRKHRQKLKKGAEFTEWPLYDVIQRDSMKYRKKRKGANTDDNDNENEFHWSKHITESFIQIRLQNDWLFRERKCAWSELLKIMLNEYGFPATLTSREICRKWASMFSEYQKARATNNKLWVYYNLFELYLGDGNLSLNPLLGWQEEWVFNLINARIDLEKSFQNYSKHPVKAWREVEKRLRSMGLPADHSVLDLPEIWKHLLNTFKWKKKFAEKGILNEQWPYYDAMARFDDIREKRPINKHKEEIHSDEGDHNVDDHEDDIKLFDLKRRLEFKPKNEFGNHCRACLTEDGSVDIYERKDDNGFDLAFKLKAVGGIEVERTDQLPSQICYNCLQELENAFKFRLKCRSTDKQLRITVIKKEILQNSEEYRVDDNDMGGRDVSDCDDTKGDLDGGEASVAFDMFPSNRTKTKTILKKERKMIRKKKIRKLRKTYDYSKICEICGKHTRNLASHLDAHNVGKKYSCDVCDKKFKFKSGLLIHRAVHDPTPKKTCEVCGKTFHILAQYRKHFVYHANERKFECHTCGKRFNTNDILKVHSRMHTDERPFSCQECGKTFRTAGCVSRHRRIVHRNVKQKPK

Summary

Pfam
PF07776   zf-AD        + More
PF00096   zf-C2H2
Interpro
IPR012934   Znf_AD        + More
IPR036236   Znf_C2H2_sf       
IPR013087   Znf_C2H2_type       
SUPFAM
SSF57667   SSF57667       
PDB
2I13     E-value=9.76486e-19,     Score=232

Ontologies

Topology

Length:
734
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01083
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00067
outside
1  -  734
 
 

Population Genetic Test Statistics

Pi
316.612458
Theta
203.070598
Tajima's D
2.99833
CLR
0.299542
CSRT
0.979451027448628
Interpretation
Uncertain
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