Gene | Transcription Factor Family | Full Seq Evalue | Best Domain Evalue | Domain Number | Alignment Detail |
---|---|---|---|---|---|
KWMTBOMO01119 | zf-C2H2 | 6.4e-28 | 0.0013 | 17 | + View |
HMM length of domain: 23 aa c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs. i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. Domain annotation for each sequence: # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to -- ----- ---- -------- -------- ------- ------ ------- ------ --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 6.9 7.5 0.15 9.2 1 21 362 382 2 5.8 1.6 0.32 19 2 23 392 414 3 4.6 3.1 0.83 50 1 23 418 440 4 1.7 0.3 6.5 3.9e+02 1 14 460 473 5 12.6 0.5 0.0023 0.14 2 23 539 561 6 2.3 1.7 4.4 2.6e+02 3 22 577 596 7 7.6 0.2 0.093 5.5 3 23 613 633 8 18.9 0.4 2.2e-05 0.0013 2 23 639 660 9 16.5 0.9 0.00014 0.0082 1 20 666 685 10 16.5 0.9 0.00014 0.0082 1 20 707 726 11 16.5 0.9 0.00014 0.0082 1 20 748 767 12 16.5 0.9 0.00013 0.0079 1 20 789 808 13 16.5 0.9 0.00014 0.0082 1 20 830 849 14 16.5 0.9 0.00013 0.0079 1 20 871 890 15 16.5 0.9 0.00014 0.0082 1 20 912 931 16 18.9 2.2 2.2e-05 0.0013 1 23 953 975 17 17.7 1.8 5.5e-05 0.0033 1 23 981 1004 Alignments for each domain: == domain 1 score: 6.9 bits; conditional E-value: 0.15 EEETTTTEEESSHHHHHHHHH CS zf-C2H2 1 ykCpdCgksFkrksnLkrHir 21 y+C+ C+k F++ +k+H r KWMTBOMO01119 362 YQCETCTKQFTHMKTYKVHTR 382 9******************98 PP == domain 2 score: 5.8 bits; conditional E-value: 0.32 EETTTTEEESSHHHHHHHHHC.C CS zf-C2H2 2 kCpdCgksFkrksnLkrHirt.H 23 +Cp+C+ +Fk+ + +H+r H KWMTBOMO01119 392 ECPVCKLRFKSEASADSHRRHtH 414 5******************9988 PP == domain 3 score: 4.6 bits; conditional E-value: 0.83 EEETTTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23 + C+ C k F++ k+H+ H KWMTBOMO01119 418 FHCKSCFKAFSNVATAKKHQLFH 440 78*****************9877 PP == domain 4 score: 1.7 bits; conditional E-value: 6.5 EEETTTTEEESSHH CS zf-C2H2 1 ykCpdCgksFkrks 14 y+C+ Cg + ++ KWMTBOMO01119 460 YTCTRCGIACGHRQ 473 9******8876665 PP == domain 5 score: 12.6 bits; conditional E-value: 0.0023 EETTTTEEESSHHHHHHHHHC.C CS zf-C2H2 2 kCpdCgksFkrksnLkrHirt.H 23 +C+ Cg F ++s+L+ H + H KWMTBOMO01119 539 TCKRCGTEFGTRSELNLHVKAqH 561 7*****************99877 PP == domain 6 score: 2.3 bits; conditional E-value: 4.4 ETTTTEEESSHHHHHHHHHC CS zf-C2H2 3 CpdCgksFkrksnLkrHirt 22 C++Cgk +++ + H + KWMTBOMO01119 577 CEHCGKAVNSRREHWWHTFK 596 ******99998776666655 PP == domain 7 score: 7.6 bits; conditional E-value: 0.093 ETTTTEEESSHHHHHHHHHCC CS zf-C2H2 3 CpdCgksFkrksnLkrHirtH 23 C+ Cgk F +k L+ H +H KWMTBOMO01119 613 CDTCGKGFQNKTILRIHELRH 633 *****************9998 PP == domain 8 score: 18.9 bits; conditional E-value: 2.2e-05 EETTTTEEESSHHHHHHHHHCC CS zf-C2H2 2 kCpdCgksFkrksnLkrHirtH 23 +C++Cg+ F +k+ L rH tH KWMTBOMO01119 639 RCDECGRAFYDKYALARHAHTH 660 7******************999 PP == domain 9 score: 16.5 bits; conditional E-value: 0.00014 EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFkrksnLkrHi 20 ++C++Cg++F+ + nL+rH KWMTBOMO01119 666 FVCTHCGQTFTLRTNLNRHA 685 89*****************6 PP == domain 10 score: 16.5 bits; conditional E-value: 0.00014 EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFkrksnLkrHi 20 ++C++Cg++F+ + nL+rH KWMTBOMO01119 707 FVCTHCGQTFTLRTNLNRHA 726 89*****************6 PP == domain 11 score: 16.5 bits; conditional E-value: 0.00014 EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFkrksnLkrHi 20 ++C++Cg++F+ + nL+rH KWMTBOMO01119 748 FVCTHCGQTFTLRTNLNRHA 767 89*****************6 PP == domain 12 score: 16.5 bits; conditional E-value: 0.00013 EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFkrksnLkrHi 20 ++C++Cg++F+ + nL+rH KWMTBOMO01119 789 FVCTHCGQTFTLRTNLNRHA 808 89*****************6 PP == domain 13 score: 16.5 bits; conditional E-value: 0.00014 EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFkrksnLkrHi 20 ++C++Cg++F+ + nL+rH KWMTBOMO01119 830 FVCTHCGQTFTLRTNLNRHA 849 89*****************6 PP == domain 14 score: 16.5 bits; conditional E-value: 0.00013 EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFkrksnLkrHi 20 ++C++Cg++F+ + nL+rH KWMTBOMO01119 871 FVCTHCGQTFTLRTNLNRHA 890 89*****************6 PP == domain 15 score: 16.5 bits; conditional E-value: 0.00014 EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFkrksnLkrHi 20 ++C++Cg++F+ + nL+rH KWMTBOMO01119 912 FVCTHCGQTFTLRTNLNRHA 931 89*****************6 PP == domain 16 score: 18.9 bits; conditional E-value: 2.2e-05 EEETTTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23 ++C++Cg++F+ + nL+rH ++H KWMTBOMO01119 953 FVCTHCGQTFTLRTNLNRHAKVH 975 89*******************99 PP == domain 17 score: 17.7 bits; conditional E-value: 5.5e-05 EEETTTTEEESSHHHHHHHHHC.C CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23 y+C+ Cgk+Fk + + + Hirt H KWMTBOMO01119 981 YECSMCGKKFKYSTSRNLHIRTvH 1004 99********************99 PP |
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