渝公网安备 50010602502065号
| Gene | Transcription Factor Family | Full Seq Evalue | Best Domain Evalue | Domain Number | Alignment Detail |
|---|---|---|---|---|---|
| KWMTBOMO00955 | CSRNP_N | 3e-12 | 2.7 | 19 | + View |
HMM length of domain: 219 aa
c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified.
Domain annotation for each sequence:
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to
-- ----- ---- -------- -------- ------- ------ ------- ------
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 0.2 0.0 0.066 5.5e+02 15 68 3185 3238
2 -2.8 0.0 0.56 4.7e+03 16 49 3448 3481
3 5.6 0.0 0.0015 13 14 103 3650 3739
4 6.5 0.0 0.00076 6.4 14 102 3834 3922
5 6.5 0.0 0.00076 6.4 14 102 4026 4114
6 0.2 0.0 0.068 5.8e+02 14 49 4218 4254
7 -0.3 0.0 0.091 7.7e+02 14 55 4414 4455
8 7.8 0.0 0.00032 2.7 14 102 4610 4698
9 0.6 0.0 0.051 4.3e+02 14 52 4794 4833
10 -0.9 0.0 0.14 1.2e+03 14 49 4990 5025
11 7.1 0.0 0.00052 4.4 14 96 5186 5268
12 2.2 0.0 0.016 1.4e+02 14 73 5361 5420
13 -2.8 0.0 0.56 4.8e+03 16 46 5544 5574
14 0.8 0.0 0.044 3.7e+02 14 53 5797 5836
15 -1.9 0.0 0.29 2.5e+03 24 94 5988 6060
16 4.7 0.2 0.0028 23 14 101 6116 6200
17 -2.2 0.0 0.36 3e+03 13 37 6279 6303
18 1.0 0.1 0.038 3.2e+02 25 97 6484 6557
19 -3.8 0.1 1.1 9.2e+03 25 38 6648 6661
Alignments for each domain:
== domain 1 score: 0.2 bits; conditional E-value: 0.066
CSRNP_N 15 yFpRlqgftsvPsqGGstLGmakkhsslkkftlaehaieqkrlrreklrerlke 68
F+ + + + ++GG+tLG + s+ ++t ++++ + ++ + l++
KWMTBOMO00955 3185 EFDPATETCVIIAEGGCTLGTRPPTASTPEYTTVDFSTTGTPFTVTEESTYLTT 3238
55556666677899********99999999999999887666655555544444 PP
== domain 2 score: -2.8 bits; conditional E-value: 0.56
CSRNP_N 16 FpRlqgftsvPsqGGstLGmakkhsslkkftlae 49
F+ + + + ++GG+tLG + ++ +t +e
KWMTBOMO00955 3448 FDPITEACVIIAEGGCTLGTRPPTYTTPGYTTTE 3481
5555555667899******887666666666555 PP
== domain 3 score: 5.6 bits; conditional E-value: 0.0015
CSRNP_N 14 yyFpRlqgftsvPsqGGstLGmakkhsslkkftlaehaieqkrlrreklrerlkeeklealklklsssdlleeeeeealevddisdedld 103
y F+ + + + ++GG+tLG + +++ ++t ++h++ + + + l++++++++++++s++d+ ++e +++l ++ ++++ ++
KWMTBOMO00955 3650 YEFDPANEICVIIAEGGCTLGTRPPTHTTPEYTTTDHSTTVLPTTVTDGSTYLTTDSSTTVTTDSSTEDAGTTEATTELPTSVTTESSTT 3739
7788888889999**********9999999********9999998888888888888887777777777666666665555445555444 PP
== domain 4 score: 6.5 bits; conditional E-value: 0.00076
CSRNP_N 14 yyFpRlqgftsvPsqGGstLGmakkhsslkkftlaehaieqkrlrreklrerlkeeklealklklsssdlleeeeeealevddisdedl 102
y F+ + + + ++GG+tLG + +++ ++t ++h++ + + + l++e+++++++++ ++d++++e +++l ++ ++++ +
KWMTBOMO00955 3834 YEFDPANEICVIIAEGGCTLGTRPPTHTTPEYTTTDHSTTALPTTVTDGSTYLTTESSTTVTTDSPTEDASTTEATTELPTSVTTESST 3922
7788888889999***********999999*********99999977777777777777777776666665555555554443444333 PP
== domain 5 score: 6.5 bits; conditional E-value: 0.00076
CSRNP_N 14 yyFpRlqgftsvPsqGGstLGmakkhsslkkftlaehaieqkrlrreklrerlkeeklealklklsssdlleeeeeealevddisdedl 102
y F+ + + + ++GG+tLG + +++ ++t ++h++ + + + l++e+++++++++ ++d++++e +++l ++ ++++ +
KWMTBOMO00955 4026 YEFDPANEICVIIAEGGCTLGTRPPTHTTPEYTTTDHSTTALPTTVTDGSTYLTTESSTTVTTDSPTEDASTTEATTELPTSVTTESST 4114
7788888889999***********999999*********99999977777777777777777776666665555555554443444333 PP
== domain 6 score: 0.2 bits; conditional E-value: 0.068
CSRNP_N 14 yyFpRlqgftsvPsqGGstLGmak.khsslkkftlae 49
y F+ + + + ++GG+tLG + +h++ + t++
KWMTBOMO00955 4218 YEFDPATETCVIIAEGGCTLGTRPpTHTTPEYTTIDS 4254
66666666777889*******9862565555555544 PP
== domain 7 score: -0.3 bits; conditional E-value: 0.091
CSRNP_N 14 yyFpRlqgftsvPsqGGstLGmakkhsslkkftlaehaieqk 55
y F+ + + + ++GG+tLG + ++ ++t + ++ +
KWMTBOMO00955 4414 YEFDPANEICVIIAEGGCTLGTRPPTYTTPEYTTIDSSTTAA 4455
7788888889999********998777777776666555544 PP
== domain 8 score: 7.8 bits; conditional E-value: 0.00032
CSRNP_N 14 yyFpRlqgftsvPsqGGstLGmakkhsslkkftlaehaieqkrlrreklrerlkeeklealklklsssdlleeeeeealevddisdedl 102
y F+ + + v ++GG+tLG + +++ ++t ++h++ + + + l++++++++++++s++d++++e +++l ++ ++++ +
KWMTBOMO00955 4610 YEFDPANEICVVIAEGGCTLGTRPPTHTTPEYTTTDHSTTALPTTVTDGSTYLTTDSSTTVTTDSSTEDASTTEATTELPTSVTTESST 4698
788889999999************99999**********99999977777777777777777777777766666555554444444433 PP
== domain 9 score: 0.6 bits; conditional E-value: 0.051
CSRNP_N 14 yyFpRlqgftsvPsqGGstLGmak.khsslkkftlaehai 52
y F+ + + + ++GG+tLG + +h++ + t++ ++
KWMTBOMO00955 4794 YEFDPATETCVIIAEGGCTLGTRPpTHTTPEYTTIDSSTT 4833
66666666777889*******9862566555555554443 PP
== domain 10 score: -0.9 bits; conditional E-value: 0.14
CSRNP_N 14 yyFpRlqgftsvPsqGGstLGmakkhsslkkftlae 49
y F+ + + + ++GG+tLG + ++ ++t +
KWMTBOMO00955 4990 YEFDPANEICVIIAEGGCTLGTRPPTYTTPEYTTID 5025
7788888889999********987766666666554 PP
== domain 11 score: 7.1 bits; conditional E-value: 0.00052
CSRNP_N 14 yyFpRlqgftsvPsqGGstLGmakkhsslkkftlaehaieqkrlrreklrerlkeeklealklklsssdlleeeeeealevdd 96
y F+ + + v ++GG+tLG + +++ ++t ++h++ + + + l++++++++++++s++d++++e +++l ++
KWMTBOMO00955 5186 YEFDPVNEICVVIAEGGCTLGTRPPTHTTPEYTTTDHSTTALPTTVTDGSTYLTTDSSTTVTTDSSTEDASTTEATTELPTSV 5268
788889999999************999999*********99999988888888888888888777777766666665554443 PP
== domain 12 score: 2.2 bits; conditional E-value: 0.016
CSRNP_N 14 yyFpRlqgftsvPsqGGstLGmak.khsslkkftlaehaieqkrlrreklrerlkeeklea 73
y F+ + + + ++GG+tLG + +h++ + t++ ++ +++ + ++l+++ +++
KWMTBOMO00955 5361 YEFDPATETCVIIAEGGCTLGTRPpTHTTPEYTTIDSSTTAATTTV-TDESTHLTTDDSTT 5420
66777777777889*******9872566655555555444443333.33333333333333 PP
== domain 13 score: -2.8 bits; conditional E-value: 0.56
CSRNP_N 16 FpRlqgftsvPsqGGstLGmakkhsslkkft 46
F+ + + + ++GG+tLG + ++ +t
KWMTBOMO00955 5544 FDPASEACVIIAEGGCTLGTRPPTDTTPGYT 5574
5555556667899******877666555555 PP
== domain 14 score: 0.8 bits; conditional E-value: 0.044
CSRNP_N 14 yyFpRlqgftsvPsqGGstLGmakkhsslkkftlaehaie 53
y F+ + + v ++GG+tLG + +s+ +t ++ ++
KWMTBOMO00955 5797 YEFDPANEVCVVIAEGGCTLGTRPPTHSTPGYTTTDSSQT 5836
7888888899999********9987666666666655554 PP
== domain 15 score: -1.9 bits; conditional E-value: 0.29
CSRNP_N 24 svPsqGGstLGmakkhsslkkftlaehaieqkrlr..reklrerlkeeklealklklsssdlleeeeeealev 94
+ ++GG+tLG + ++ ++ + + ++ e++ +++ +++++ + +++++++++ + e+++++
KWMTBOMO00955 5988 VIIAEGGCTLGTTPPIDTTSSYITTTLSPTDGSTVvtTERTTNTEVPTSMTTNDATTMTTEVTSATSETTTDI 6060
56689******98766555555433333322222200222222222222222222333333333333333333 PP
== domain 16 score: 4.7 bits; conditional E-value: 0.0028
CSRNP_N 14 yyFpRlqgftsvPsqGGstLGmakkhsslkkftlaehaieqkrlrreklrerlkeeklealklklsssdlleeeeeealevddisded 101
+ F+ +q + + ++GG+tLG + +++++ a ++ +++ +++ ++ + +++ + k++++ + ++ +++++e +s++
KWMTBOMO00955 6116 FEFDPIQETCVIIAEGGCTLGPVPNPTTTQSPNTATTETPTQTESSTTTAATT-QGYSTTEDDKSTTEFTATTADDATSE--ATSEST 6200
899999**999**********99888877765554444333333222221111.11111122222222222222222222..222222 PP
== domain 17 score: -2.2 bits; conditional E-value: 0.36
CSRNP_N 13 vyyFpRlqgftsvPsqGGstLGmak 37
y F+ + + v ++GG+tLG ++
KWMTBOMO00955 6279 GYEFDPASEQCVVIAEGGCTLGGTS 6303
57888888888999*******9765 PP
== domain 18 score: 1.0 bits; conditional E-value: 0.038
CSRNP_N 25 vPsqGGstLGmakkhsslkkftlaehaieqkrlrre.klrerlkeeklealklklsssdlleeeeeealevddi 97
+ ++GG+tLG a++ +++ + ++ ++ +++ r + ++ ++ ++ ea +++ ++s ++e++++++ ++
KWMTBOMO00955 6484 IIAEGGCTLGPATSPTEVTDGGFSTEQTFTTTERTTsHTTTTDDAATPEASTTTDITSPTVEQTDATTHAPTET 6557
5689******9998877766444333322222222202222222333344444455555566665554433333 PP
== domain 19 score: -3.8 bits; conditional E-value: 1.1
CSRNP_N 25 vPsqGGstLGmakk 38
v ++GG+tLG a++
KWMTBOMO00955 6648 VIAEGGCTLGPATS 6661
5689*****97765 PP
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渝公网安备 50010602502065号