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| Gene | Transcription Factor Family | Full Seq Evalue | Best Domain Evalue | Domain Number | Alignment Detail |
|---|---|---|---|---|---|
| KWMTBOMO04724 | zf-C2H2 | 2.3e-25 | 0.00075 | 20 | + View |
HMM length of domain: 23 aa
c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified.
Domain annotation for each sequence:
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to
-- ----- ---- -------- -------- ------- ------ ------- ------
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 6.3 0.7 0.23 14 1 23 81 104
2 5.2 0.4 0.53 32 3 23 109 129
3 8.9 0.1 0.035 2.1 2 23 133 155
4 12.2 0.1 0.0032 0.19 1 20 405 424
5 7.6 0.4 0.093 5.5 3 23 437 457
6 3.2 0.2 2.2 1.3e+02 1 23 473 496
7 11.1 1.7 0.0067 0.4 1 23 505 528
8 2.5 3.4 3.6 2.2e+02 1 23 540 563
9 2.2 0.5 4.6 2.8e+02 6 23 576 595
10 9.0 0.9 0.031 1.9 2 23 606 628
11 3.9 2.7 1.3 79 1 23 633 656
12 16.6 2.8 0.00013 0.0076 1 23 662 684
13 12.8 0.9 0.002 0.12 2 23 692 713
14 16.1 3.0 0.00018 0.011 1 23 718 740
15 14.0 1.4 0.00081 0.048 1 23 746 768
16 19.7 1.5 1.2e-05 0.00075 1 23 774 796
17 11.6 3.8 0.0047 0.28 2 23 803 824
18 13.0 0.6 0.0018 0.11 2 23 832 854
19 15.0 0.3 0.00041 0.025 1 23 859 881
20 13.7 4.3 0.0011 0.063 1 23 887 910
Alignments for each domain:
== domain 1 score: 6.3 bits; conditional E-value: 0.23
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
y C C+ F+++s L++H+ H
KWMTBOMO04724 81 YSCLLCSFWFTNRSRLVVHYILnH 104
89*****************98877 PP
== domain 2 score: 5.2 bits; conditional E-value: 0.53
ETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 3 CpdCgksFkrksnLkrHirtH 23
C++C + +++++ ++H++ H
KWMTBOMO04724 109 CGICRYFVPNRESWTSHLQFH 129
******************988 PP
== domain 3 score: 8.9 bits; conditional E-value: 0.035
EETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 2 kCpdCgksFkrksnLkrHirt.H 23
+C+ C + F + +L+ H++t H
KWMTBOMO04724 133 PCSQCIQNFATEKLLRDHMSTaH 155
6999*****************99 PP
== domain 4 score: 12.2 bits; conditional E-value: 0.0032
EEETTTTEEESSHHHHHHHH CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHi 20
y C +C+ +F + s+L++H
KWMTBOMO04724 405 YMCRVCSNTFETLSDLESHV 424
89*****************7 PP
== domain 5 score: 7.6 bits; conditional E-value: 0.093
ETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 3 CpdCgksFkrksnLkrHirtH 23
C C+k F ++ +rH+ H
KWMTBOMO04724 437 CQFCDKEFENRVTTRRHLEDH 457
*****************9877 PP
== domain 6 score: 3.2 bits; conditional E-value: 2.2
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
+kC +C+ F + + ++H+ + H
KWMTBOMO04724 473 FKCRYCPILFWNEGDRETHQIKvH 496
8******99988888888888877 PP
== domain 7 score: 11.1 bits; conditional E-value: 0.0067
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
ykC+ C+k F+++ + +H+ + H
KWMTBOMO04724 505 YKCESCDKLFSDQVWFLHHYLSeH 528
9******************99988 PP
== domain 8 score: 2.5 bits; conditional E-value: 3.6
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
ykC C +F++ + ++H + H
KWMTBOMO04724 540 YKCCLCLFCFPSIDAVRSHFSAeH 563
9******************87666 PP
== domain 9 score: 2.2 bits; conditional E-value: 4.6
TT.EEESSHHHHHHHHHC.C CS
zf-C2H2 6 Cg.ksFkrksnLkrHirt.H 23
C+ k+ +++ ++k H++t H
KWMTBOMO04724 576 CKyKPLSQRKSFKIHLKTlH 595
5568999***********99 PP
== domain 10 score: 9.0 bits; conditional E-value: 0.031
EETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 2 kCpdCgksFkrksnLkrHirt.H 23
+Cp+C++ Fk++ ++Hi H
KWMTBOMO04724 606 ECPVCSRDFKSQKACNAHITQmH 628
6*************999998777 PP
== domain 11 score: 3.9 bits; conditional E-value: 1.3
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
ykC+ C++s ++++ k H+ + H
KWMTBOMO04724 633 YKCKLCKESLHSSDERKLHYLIrH 656
9******************98877 PP
== domain 12 score: 16.6 bits; conditional E-value: 0.00013
EEETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23
y+C+ CgksF ks+L H + H
KWMTBOMO04724 662 YTCTQCGKSFQYKSSLYMHKQEH 684
9******************9998 PP
== domain 13 score: 12.8 bits; conditional E-value: 0.002
EETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 2 kCpdCgksFkrksnLkrHirtH 23
+C++C+k+F k++++ H+ +H
KWMTBOMO04724 692 TCNYCNKVFLKKDSFREHLLIH 713
8******************999 PP
== domain 14 score: 16.1 bits; conditional E-value: 0.00018
EEETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23
+ C++C+++F ++sn+ rH r+H
KWMTBOMO04724 718 HACSYCPMRFVQRSNMLRHERRH 740
56********************9 PP
== domain 15 score: 14.0 bits; conditional E-value: 0.00081
EEETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23
y Cp+C+++F +k ++H r+H
KWMTBOMO04724 746 YACPHCDRTFADKGACNAHVRSH 768
88*******************99 PP
== domain 16 score: 19.7 bits; conditional E-value: 1.2e-05
EEETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23
y C +Cg++F +ks L+ H r+H
KWMTBOMO04724 774 YACMYCGQTFVQKSKLTYHVRKH 796
88********************9 PP
== domain 17 score: 11.6 bits; conditional E-value: 0.0047
EETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 2 kCpdCgksFkrksnLkrHirtH 23
+C++C+k F++ +L+ H++tH
KWMTBOMO04724 803 TCSVCSKLFTSVCSLREHMKTH 824
7********************9 PP
== domain 18 score: 13.0 bits; conditional E-value: 0.0018
EETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 2 kCpdCgksFkrksnLkrHirt.H 23
kCp C+k++ + + rH+rt H
KWMTBOMO04724 832 KCPLCDKKYQDERYMLRHLRTaH 854
8********************99 PP
== domain 19 score: 15.0 bits; conditional E-value: 0.00041
EEETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23
++Cp Cgk+ +++ L+ H tH
KWMTBOMO04724 859 FPCPLCGKCLSSSVGLRLHVITH 881
89*******************99 PP
== domain 20 score: 13.7 bits; conditional E-value: 0.0011
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
+ C++C+k F+ k +++H+r+ H
KWMTBOMO04724 887 FHCKVCPKGFSVKKTMMKHLRRrH 910
78********************99 PP
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渝公网安备 50010602502065号