HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	16.4	6.0	0.00015	0.0088	1	23	262	286
2	21.6	0.5	3.2e-06	0.00019	1	23	292	316
3	19.9	2.2	1.1e-05	0.00065	1	23	322	344

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 0.00015
                    EEET..TTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCp..dCgksFkrksnLkrHirtH 23 
                    + C+  +C+k+++ +s+Lk+H+r+H
  KWMTBOMO00395 262 HHCDfmGCTKVYTKSSHLKAHQRIH 286
                    569999******************9 PP

  == domain 2  score: 21.6 bits;  conditional E-value: 3.2e-06
                    EEET..TTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCp..dCgksFkrksnLkrHirtH 23 
                    y+C   +C ++F r+++L+rH+r+H
  KWMTBOMO00395 292 YTCQwpECEWRFARSDELTRHYRKH 316
                    99**********************9 PP

  == domain 3  score: 19.9 bits;  conditional E-value: 1.1e-05
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    +kC++C +sF r+++L  H ++H
  KWMTBOMO00395 322 FKCSVCERSFARSDHLALHNKRH 344
                    8*******************999 PP