Silkworm Genome Informatics Database

Gene

KWMTBOMO00395

Pre Gene Modal

BGIBMGA000499

Annotation

PREDICTED:_Krueppel-like_factor_5_[Bombyx_mori]

Location

Bomo_Chr1(-):11586477-11593008 View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear Reliability : 4.829

CDS

ATGTACATGTATGACGAAAGTAATGCCCCTCCCTCAACAGTTCAAGTAAACAATAGAAAGACATCGGAACTTGAGTCGCTGCTGTGCAAGCAGGAGGGCGCCTCACTCGCGCCCGCCCACATGGACCTTTTCGATGGCGGTACTTCCTCCCGCGACGATGCGTTCCTCCGTCCTGCCTTGTGGGAGGACATTGCCTCCTCCATCAGAAACATCGACCCCGAGAATGCGAACATGCTCGCTCCGTTGGGAGCCACACACGTCAAATTGGAAGCAGATGAAGCATTGCTCGAAGAATGCGCTACACCGCTACTCAGTCCTCTCGAGATCAAGACGGAAAGACTGTGCGCTCCTCCTGCGTACGCGCAGCCGCAGCCGCCACAGCTGCAGCAGCAGCCACATCAGCCGCCGACATCGTACGCCAAGTATCCGCCGTCGCGACTCGTTTACATGTCGCCGCTGACGCCGCCAGGTTCCGACCAAGGCAGTCCCGGGAACTCGATGCAGGGAGGGCCACGGCGAACGCCTCCGCCGCCGTACCACCCGCCTCCGCATCTACGTGCCCCACAAGTGCAGCCACATCCTGGCTCGCATCTACACCATCAGCAGACTTTTTCGAATGTTTACCAGACCATGCCGCAGACTTTGGCGATGCCGCAACAGCACGCCATGCCGCCCGCGCCGCAACCGATGGTACACGCACCGCTGCAGCATTCGCGGCTCGCGCCCCCTCCTCCTATGAAGTATAACAGACGAAATAATCCTGAACTTGAAAAGAGAAGAGTGCATCATTGTGATTTCATGGGTTGCACGAAAGTTTACACGAAAAGTTCTCATCTCAAAGCTCACCAACGGATCCATACAGGAGAAAAGCCGTATACTTGTCAGTGGCCGGAATGCGAATGGCGGTTCGCGCGGTCCGACGAATTAACACGACACTACCGTAAGCACACCGGCGCGAAACCTTTCAAATGCTCCGTCTGTGAGAGATCTTTTGCGAGATCCGACCACCTCGCTCTACACAATAAGCGGCACCTGCCGAAGACTTCTAAATGA

Protein

MYMYDESNAPPSTVQVNNRKTSELESLLCKQEGASLAPAHMDLFDGGTSSRDDAFLRPALWEDIASSIRNIDPENANMLAPLGATHVKLEADEALLEECATPLLSPLEIKTERLCAPPAYAQPQPPQLQQQPHQPPTSYAKYPPSRLVYMSPLTPPGSDQGSPGNSMQGGPRRTPPPPYHPPPHLRAPQVQPHPGSHLHHQQTFSNVYQTMPQTLAMPQQHAMPPAPQPMVHAPLQHSRLAPPPPMKYNRRNNPELEKRRVHHCDFMGCTKVYTKSSHLKAHQRIHTGEKPYTCQWPECEWRFARSDELTRHYRKHTGAKPFKCSVCERSFARSDHLALHNKRHLPKTSK

Uniprot

A0A194QN06 A0A194PF03 H9ITB9

Pubmed

26354079 19121390

EMBL

KQ461196 KPJ06355.1 KQ459605 KPI91946.1 BABH01007208

Proteomes

UP000053240 UP000053268 UP000005204

PRIDE

H9ITB9

Pfam

PF00096 zf-C2H2

Interpro

IPR036236 Znf_C2H2_sf + More
IPR013087 Znf_C2H2_type

SUPFAM

SSF57667 SSF57667

ProteinModelPortal

A0A194QN06 A0A194PF03 H9ITB9

PDB

2EBT E-value=3.10109e-38, Score=397

KEGG

105842151 K09206 krueppel-like factor 5 | (RefSeq) Krueppel-like factor 5

GO

GO:0003676 GO:0046872 GO:0045454 GO:0003824 GO:0008152 GO:0043401 GO:0003677 GO:0003707 GO:0007169 GO:0016021

Length:

350

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.02264

outside

1 - 350

Pi

27.497714

Theta

22.428481

Tajima's D

0.85409

CLR

0.023628

CSRT

0.622818859057047

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics