HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	11.2	0.6	0.0063	0.38	3	23	293	313
2	18.0	0.9	4.6e-05	0.0028	1	23	319	341
3	21.8	0.2	2.8e-06	0.00017	1	23	347	369
4	2.3	0.2	4.3	2.6e+02	1	10	380	389

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.0063
                    ETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   3 CpdCgksFkrksnLkrHirtH 23 
                    C+ Cgk+ +++  L+rH  +H
  KWMTBOMO05366 293 CGACGKRLSSRGALRRHAHVH 313
                    999**************9988 PP

  == domain 2  score: 18.0 bits;  conditional E-value: 4.6e-05
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    + C++Cg++F ++s L+rH  +H
  KWMTBOMO05366 319 HACSVCGRTFAQRSVLQRHKLVH 341
                    56*****************9998 PP

  == domain 3  score: 21.8 bits;  conditional E-value: 2.8e-06
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    ++C+ C ksF+++s L +H+r H
  KWMTBOMO05366 347 FQCEWCAKSFTQRSALAAHRRAH 369
                    89*******************99 PP

  == domain 4  score: 2.3 bits;  conditional E-value: 4.3
                    EEETTTTEEE CS
        zf-C2H2   1 ykCpdCgksF 10 
                    ++C +C+k F
  KWMTBOMO05366 380 HRCAHCTKLF 389
                    79*****977 PP