Gene

KWMTBOMO16788

Pre Gene Modal

BGIBMGA004594

Annotation

hypothetical_protein_KGM_08890_[Danaus_plexippus]

Location

Bomo_Scaf236(-):3820-12345      View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 2.641

CDS

ATGCGCCGGACGTCTTATCCGTTAGACATCGGACGCCGTATCGGGATGGCTAAAAGCGCCATGACTAGCCTCGATAAAATCTGGAAAGACCGTAATATTCGCCGAGTAACTAAGATGCGTCTGGTTCGTACGTTGGTCTTCTCTAGTCTGTCGCACAGCCACAATCCAGTCGACGACGAGGCCATGCAGCTGAAGAAGCAAAATCGTTATGTTTGTGATTTTTGTCCTGAAGAATTTATGTACATGAGATGTCTGCAGGCCCACCGGACGAACGCGCACCCTGAGTCCGCCTCGAAGGCCGTGACGCACCGCTGCTGGAAGTGCTCGCGGCAGTTCGCGCACCTCAATTCCCTGCGGCGGCACTTTATGACGCACACCGGCGAGAGGAACTTCCTGTGCAACGTGTGCGGGAAGGCAATGAGCTCGAGGGACCATCTCAAGCTACACATAAATATACACACCGGCTACAAGCCAAACGTTTGTTCGACATGCGGTAAGGGTTTCGTCAAGAAGAGCAACCTGAAGCTGCACGAGCGCGTCCACAGCGGCGAGAAGCCGTACGTGTGCTCGCACTGCGGGAAGGCGTTCAGCCAGCGATCGACGCTCGTCATACACGAGAGATACCACAACGGTGTGCGGCCGTACGTGTGCGCGCTGTGCGGTCGCGGATTCGTCGCCAAGGGGCTGCTGTCCGTGCACCTCAAGAACACTTGCATATAG

Protein

MRRTSYPLDIGRRIGMAKSAMTSLDKIWKDRNIRRVTKMRLVRTLVFSSLSHSHNPVDDEAMQLKKQNRYVCDFCPEEFMYMRCLQAHRTNAHPESASKAVTHRCWKCSRQFAHLNSLRRHFMTHTGERNFLCNVCGKAMSSRDHLKLHINIHTGYKPNVCSTCGKGFVKKSNLKLHERVHSGEKPYVCSHCGKAFSQRSTLVIHERYHNGVRPYVCALCGRGFVAKGLLSVHLKNTCI

Uniprot

H9J504   A0A2A4J790   A0A2W1BJD3   A0A212FK79   A0A0N1I2X9   A0A0N1PH32   + More
A0A0T6BCM2   A0A1B6DS78   A0A1B6CYS7   A0A2P8YKV7   A0A1B6MFN6   A0A2J7Q3V2   A0A1B6JHX8   A0A2P8YKW3   A0A2J7Q3Y2   A0A158NRK0   A0A2J7Q3V5   A0A0J7LB32   A0A195DID2   A0A151XHK1   A0A0C9PXR1   N6UDI0   A0A1W4XSB9   A0A195BE93   A0A2J7Q3X1   A0A2J7Q3W8   K7J2J8   A0A067R970   D6WI10   U4UBE3   N6TG29   A0A2J7Q3X6   A0A2J7Q3X9   S7PHY7   A0A0C9RH48   A0A0L8I5F3   A0A1Y1KXA4   A0A1Y1KQB5   A0A3Q7WXI7   A0A154PDD8   A0A158NRK1   E9IG27   A0A0L8H3A7   A0A061IKZ4  

Pubmed

19121390    28756777    22118469    26354079    29403074    21347285    + More
23537049    20075255    24845553    18362917    19820115    28004739    21282665    23929341   

EMBL

BABH01025762    NWSH01002922    PCG67292.1    KZ150258    PZC71773.1    AGBW02008114    + More
OWR54144.1    KQ459444    KPJ00941.1    KQ460077    KPJ17861.1    LJIG01001985    KRT84955.1    GEDC01008767    JAS28531.1    GEDC01018885    GEDC01018557    GEDC01015550    GEDC01005938    GEDC01004527    JAS18413.1    JAS18741.1    JAS21748.1    JAS31360.1    JAS32771.1    PYGN01000522    PSN44890.1    GEBQ01005210    JAT34767.1    NEVH01018421    PNF23268.1    GECU01009203    JAS98503.1    PSN44891.1    PNF23294.1    ADTU01023970    PNF23271.1    LBMM01000082    KMR05043.1    KQ980824    KYN12596.1    KQ982123    KYQ59882.1    GBYB01006263    JAG76030.1    APGK01039284    KB740969    KB632230    ENN76717.1    ERL90356.1    KQ976511    KYM82485.1    PNF23270.1    PNF23267.1    KK852613    KDR20226.1    KQ971332    EFA01039.1    ERL90357.1    ENN76718.1    PNF23291.1    PNF23269.1    KE162980    EPQ10338.1    GBYB01006261    JAG76028.1    KQ416508    KOF96697.1    GEZM01076971    JAV63497.1    GEZM01076973    JAV63494.1    KQ434878    KZC09926.1    ADTU01023971    GL762910    EFZ20434.1    KQ419432    KOF83564.1    KE664221    ERE90162.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000053240    UP000245037    + More
UP000235965    UP000005205    UP000036403    UP000078492    UP000075809    UP000019118    UP000030742    UP000192223    UP000078540    UP000002358    UP000027135    UP000007266    UP000053454    UP000286642    UP000076502    UP000030759   

PRIDE

H9J504   

Pfam

PF07776   zf-AD        + More
PF00096   zf-C2H2
PF01352   KRAB

Interpro

IPR012934   Znf_AD        + More
IPR013087   Znf_C2H2_type       
IPR036236   Znf_C2H2_sf       
IPR001909   KRAB       
IPR017114   YY-1-like       
IPR036051   KRAB_dom_sf       

SUPFAM

SSF57667   SSF57667        + More
SSF109640   SSF109640       

CDD

cd07765  KRAB_A-box

ProteinModelPortal

H9J504   A0A2A4J790   A0A2W1BJD3   A0A212FK79   A0A0N1I2X9   A0A0N1PH32   + More
A0A0T6BCM2   A0A1B6DS78   A0A1B6CYS7   A0A2P8YKV7   A0A1B6MFN6   A0A2J7Q3V2   A0A1B6JHX8   A0A2P8YKW3   A0A2J7Q3Y2   A0A158NRK0   A0A2J7Q3V5   A0A0J7LB32   A0A195DID2   A0A151XHK1   A0A0C9PXR1   N6UDI0   A0A1W4XSB9   A0A195BE93   A0A2J7Q3X1   A0A2J7Q3W8   K7J2J8   A0A067R970   D6WI10   U4UBE3   N6TG29   A0A2J7Q3X6   A0A2J7Q3X9   S7PHY7   A0A0C9RH48   A0A0L8I5F3   A0A1Y1KXA4   A0A1Y1KQB5   A0A3Q7WXI7   A0A154PDD8   A0A158NRK1   E9IG27   A0A0L8H3A7   A0A061IKZ4  

PDB

5V3G     E-value=9.58869e-29,     Score=313

KEGG

101744112    no KO assigned | (RefSeq) zinc finger protein 484-like

GO

GO:0005634   GO:0003676   GO:0008270   GO:0046872   GO:0006355   GO:0016020   GO:0004888   GO:0007166   GO:0016773   GO:0006096   GO:0006281   GO:0006259  

Length:

239

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04448

Exp number, first 60 AAs:

0.00411

Total prob of N-in:

0.09283

outside

1  -  239

 

 

Pi

13.652093

Theta

13.197637

Tajima's D

0.048854

CLR

0

CSRT

0.394380280985951

Interpretation

Uncertain