SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16751
Pre Gene Modal
BGIBMGA012741
Annotation
PREDICTED:_uncharacterized_protein_LOC101744504_[Bombyx_mori]
Transcription factor
Location in the cell
Nuclear   Reliability : 4.601
 

Sequence

CDS
ATGACAATGGACGTTCAAAATAATTATCAAAACTATAAAGAATCTTCGCCCGATCCAAAAGAGTCGAATTTGAATATCGAAAGTGCCAGAACGTCTCAGGCCGGGAGAGCTGAGATGTCGACCATCGTAAATCAAGGAAAGAGTTCGAAACGATCATTCGACGTCGCCTTCCTGATGATGCCGGATGATAAATTTCGACAGAAGCAGCCAGAGAAGCAACTGCGAGTGTCCAAGCAAATCTTCCACGGTGAAGAGTGGGAACAATTTCCGAAAAGAATCCCAGAGGCTTATAAACGCGATGAATACTCCAGCGATAACTCCAACACACTAAAAGATCAGGAAGAGGACAGGATTCGAGCGAACAATAACATATCGCCAACTTTTAGTTCCGATATTAACATTGATGTCGGAACGGACGAATACCCCAGTAAGTCGATGTATTGTAGTGATTCAGAAAATTCGGACAAGTCTCGAAGTCGACCTAACTCAAACGAAAGCGCAGCGCGACAGCCTAAATTCCTTCCGGAATACAAAAACAAAATATTTGATGATCCAACACTAATCACGATGCAATCCCGCGCAAGATACGACCGAGCTGAAGAGTCACCTAAAAGTGCTTTTACGAAAGTGTCTCATTATTCTATGAGGTCTCCGAATCCTTCCGTGAGCCCTGATAACCTGCTTTATCAGAATTCCGTCAGCCCTCCGCTGTCCGCGGCCAGTCCACCTGTAAATTTCACCAAGACGCCGCACTTCAACAACCTGCTGAATCCAGCTCATCTGATGAACGGGAGCGGCTTTTTCAAAGGTCAGAACACGCCCTCGTCGTCTCCAAGCTACCCGGATTCAGCATTGCAACAACGTCCAGCCACATTTAGTAAAGCTATTGAGTTTCACGAAAAATCTTCGGATCATAAAGCGTCACCAAATAAGATGAATTTTCTACCGTTCAGACCCGAAATACCGTATCTTCAAGCCGGAGGGTCCTATCAATTTCAGAACTTCCAAACGGCAAATTCGGATTTCATGAAATTTCCTGTGCCTCCTCGAGAGCCGGTCAGTCCGCTGATAGCAAACCCAGCAGCAGCCATCCTGAGTACTTTACTGCCGCCTACTTTAGCTGCTTTTTCGTTGCCAGCACAGAATGTTTGCGCTAAGTGCAGCATCAGTTTCAGGATGACTTCTGACTTAGTTTACCACATGCGAACGCATCACAAGAGCGAGAACGTAGTCGATCCCAATAGGAGAAAAAGAGAGGAGAAACTGAAGTGTCCGGTTTGCAATGAGAGCTTCAGAGAGAGGCATCATTTAACAAGACACATGACGGCCCACCAGGACAAAGAAGGCGACATGGACGACGTGTCCCCTTCGCAAAATTACAAGAAATCCAAACAATTTTATTCCCACAATAGTGGATCGATAATTCACAAGTAA
Protein
MTMDVQNNYQNYKESSPDPKESNLNIESARTSQAGRAEMSTIVNQGKSSKRSFDVAFLMMPDDKFRQKQPEKQLRVSKQIFHGEEWEQFPKRIPEAYKRDEYSSDNSNTLKDQEEDRIRANNNISPTFSSDINIDVGTDEYPSKSMYCSDSENSDKSRSRPNSNESAARQPKFLPEYKNKIFDDPTLITMQSRARYDRAEESPKSAFTKVSHYSMRSPNPSVSPDNLLYQNSVSPPLSAASPPVNFTKTPHFNNLLNPAHLMNGSGFFKGQNTPSSSPSYPDSALQQRPATFSKAIEFHEKSSDHKASPNKMNFLPFRPEIPYLQAGGSYQFQNFQTANSDFMKFPVPPREPVSPLIANPAAAILSTLLPPTLAAFSLPAQNVCAKCSISFRMTSDLVYHMRTHHKSENVVDPNRRKREEKLKCPVCNESFRERHHLTRHMTAHQDKEGDMDDVSPSQNYKKSKQFYSHNSGSIIHK

Summary

Pfam
PF00096   zf-C2H2
Interpro
IPR036236   Znf_C2H2_sf        + More
IPR013087   Znf_C2H2_type       
SUPFAM
SSF57667   SSF57667       
PDB
1MEY     E-value=0.0123283,     Score=92

Ontologies

Topology

Length:
477
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.19077
Exp number, first 60 AAs:
0
Total prob of N-in:
0.01747
outside
1  -  477
 
 

Population Genetic Test Statistics

Pi
0
Theta
0
Tajima's D
0
CLR
0
CSRT
0
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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