HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	13.2	0.4	0.0015	0.089	5	23	21	40
2	11.3	0.8	0.0058	0.35	1	23	49	72
3	1.8	0.6	6.1	3.7e+02	2	12	110	120
4	20.0	0.1	1.1e-05	0.00064	2	23	149	170
5	19.0	3.6	2.2e-05	0.0013	1	23	176	198
6	17.0	0.2	9.4e-05	0.0056	1	23	204	226
7	22.6	0.7	1.5e-06	9.1e-05	1	23	232	255

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 0.0015
                   TTTEEESSHHHHHHHHHC.C CS
        zf-C2H2  5 dCgksFkrksnLkrHirt.H 23
                   +Cg++F++ ++L+ H+ + H
  KWMTBOMO06093 21 ECGETFPTEDDLRLHLEKeH 40
                   7***************9988 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 0.0058
                   EEETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2  1 ykCpdCgksFkrksnLkrHirt.H 23
                   +kC++C+k+F+  ++ +rH+   H
  KWMTBOMO06093 49 FKCGVCDKTFSLEEECVRHYEEaH 72
                   8*********98888888877666 PP

  == domain 3  score: 1.8 bits;  conditional E-value: 6.1
                    EETTTTEEESS CS
        zf-C2H2   2 kCpdCgksFkr 12 
                    +C+ Cg+++ +
  KWMTBOMO06093 110 VCEFCGEVYAS 120
                    7******9976 PP

  == domain 4  score: 20.0 bits;  conditional E-value: 1.1e-05
                    EETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   2 kCpdCgksFkrksnLkrHirtH 23 
                    +C++Cg++++++  L+ H+r+H
  KWMTBOMO06093 149 VCEVCGRKYTSNAALRYHQRVH 170
                    7********************9 PP

  == domain 5  score: 19.0 bits;  conditional E-value: 2.2e-05
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    ykC+ C k+F+ +  Lk+H rtH
  KWMTBOMO06093 176 YKCHMCEKTFTMPLFLKVHVRTH 198
                    9*********************9 PP

  == domain 6  score: 17.0 bits;  conditional E-value: 9.4e-05
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    y+C  C+k F++k  L rH r+H
  KWMTBOMO06093 204 YQCLQCPKAFSNKAALLRHDRVH 226
                    9******************7666 PP

  == domain 7  score: 22.6 bits;  conditional E-value: 1.5e-06
                    EEETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirt.H 23 
                    ykCp+Cgk F+++ ++k H +t H
  KWMTBOMO06093 232 YKCPKCGKAFSQSNSMKLHVSTvH 255
                    9********************999 PP