Gene

KWMTBOMO16482

Pre Gene Modal

BGIBMGA002210

Annotation

PREDICTED:_uncharacterized_protein_LOC101737771_isoform_X3_[Bombyx_mori]

Location

Bomo_Scaf001(+):249486-252167      View in EpiBrowser

Transcription factor

THAP

Location in the cell

Nuclear   Reliability : 4.045

CDS

ATGCCTGATACTCATCGTACTTGTGAAGTTTGTGGTATCAAAGAAAGACATCTTAATGAAAAACGGTTTTTCGCAAGGTTTCCTCTGGATGTCAATAGATGTAAAGAGTGGGTAAAAATAGTTGGCAAAGAAGATCTGGCTTATCTCCAAGTACATATGCTACATGATTTAAAACATGTTTGTGAAGTACATTTCTCAAGGCGAGACTTTACAAAATCAAAGAAGCGCTTAAAAAAACGAGCTGTACCCAAACTGAACTTGACACCGCCACCATTGAGAGATGAAATTCTTTTTCAATTTTTGCAACTTAACTCACAAGCGGATGTCACCCCACAAGGCCAGTTTGAGGTTCAGGCCGTTCCTAGTGATTCAATGCCAGCATCCTCAAGTCAGCATAGCAGTCTAGAGAAAATGGATGTCACCCCACAAGGCCAGTTTGAGGTTCAGGCTGTTCCTAGTGCTTCAATGCCGACATCCTCAAGTCAGTCTAGCAGTCTAGAGAAAAACGTCACCACACGAAGCCAGCAGAAGGAAAGTGAAAGTCAAATAAGAAAAAGAAAATTAGAAGATGTTGATGTAACACCACGGAAAAGGAAGCTCTTAAGTGAATTGAGAAAAACAAAGTGCACATTGGCATCATTAAAAAAGAGCGCGAAACTAATAGACAATTTATCGTCAGAATTTCTAAAAGAAATTGTCACATCCGCGTTGAAAAATCAAAAGCGTAAGTCACAAGGTAAACGATGGACTATTAAAAATAAAATATCAGCATTAGCCATCTTCAAGCGTTCACCAAAAGCTTACCGATATTTGCGATATCTCGCACCATTTCCGAGTATCAAAACAATGCAAAAATTAATGACAAAAATACCTGTTGAGCCAGATTTAAATACAGCTGTACTTGACTACCTGAAAAAACTAGCTCCCATTAAAAAAATAAGAGCAAAATTATGCTCGGTAGTCTTTAACGAAATAGCGTTAAAAGAAAGATTAACTTATAGTGAAGCCACAGATAAAGTGGAAGGATTTATCGATTATGGATATGAGAGGAAAAATGAGCTAGCAAACCATGCCTTAGTCTTCATGTTATAA

Protein

MPDTHRTCEVCGIKERHLNEKRFFARFPLDVNRCKEWVKIVGKEDLAYLQVHMLHDLKHVCEVHFSRRDFTKSKKRLKKRAVPKLNLTPPPLRDEILFQFLQLNSQADVTPQGQFEVQAVPSDSMPASSSQHSSLEKMDVTPQGQFEVQAVPSASMPTSSSQSSSLEKNVTTRSQQKESESQIRKRKLEDVDVTPRKRKLLSELRKTKCTLASLKKSAKLIDNLSSEFLKEIVTSALKNQKRKSQGKRWTIKNKISALAIFKRSPKAYRYLRYLAPFPSIKTMQKLMTKIPVEPDLNTAVLDYLKKLAPIKKIRAKLCSVVFNEIALKERLTYSEATDKVEGFIDYGYERKNELANHALVFML

Uniprot

H9IY77   A0A2A4JZ58   J9M897   A0A2A4JYS8   A0A2A4JY71   A0A1Y1JZB1   + More
J9M4P5   X1X0K7   D2A039   A0A2P8ZAL9   A0A3S2LM91   J9L7T1   X1XB84   A0A1Y1NI49   A0A2A4JPP6   J9KEP3   X1XMZ9   J9M6Y7   J9M9N1   A0A3S2TCD1   A0A3S2L9N1   J9LCP7   A0A3S2NSI9   J9KSA4   A0A1Y1KN14   X1WY51   X1X2A6   A0A1Y1KI01   A0A1Y1KFJ5  

Pubmed

19121390    28004739    18362917    19820115    29403074   

EMBL

BABH01038377    NWSH01000363    PCG76968.1    ABLF02019592    PCG76969.1    PCG76967.1    + More
GEZM01101736    JAV52346.1    ABLF02008684    ABLF02008686    ABLF02008687    ABLF02007888    ABLF02010654    ABLF02010656    ABLF02025687    ABLF02031254    ABLF02066237    KQ971338    EFA01749.1    PYGN01000122    PSN53542.1    RSAL01003176    RVE40327.1    ABLF02017696    ABLF02011758    ABLF02011759    GEZM01001796    JAV97521.1    NWSH01000959    PCG73380.1    ABLF02017444    ABLF02004413    ABLF02016452    ABLF02049812    ABLF02056148    ABLF02034357    ABLF02017692    ABLF02017693    RSAL01000404    RVE41902.1    RSAL01000375    RVE42104.1    ABLF02009194    RSAL01000257    RVE43416.1    ABLF02016553    ABLF02016555    ABLF02049531    GEZM01085095    JAV60237.1    ABLF02023467    ABLF02002694    ABLF02004565    ABLF02043824    ABLF02046469    GEZM01085094    JAV60238.1    GEZM01085093    JAV60239.1   

Proteomes

UP000005204    UP000218220    UP000007819    UP000007266    UP000245037    UP000283053    + More

PRIDE

H9IY77   

Pfam

PF05485   THAP        + More
PF12017   Tnp_P_element
PF14291   DUF4371
PF05699   Dimer_Tnp_hAT
PF04937   DUF659
PF03564   DUF1759
PF04727   ELMO_CED12
PF05585   DUF1758

Interpro

IPR006612   THAP_Znf        + More
IPR021896   Transposase_37       
IPR038441   THAP_Znf_sf       
IPR025398   DUF4371       
IPR012337   RNaseH-like_sf       
IPR008906   HATC_C_dom       
IPR007021   DUF659       
IPR006816   ELMO_dom       
IPR001878   Znf_CCHC       
IPR036875   Znf_CCHC_sf       
IPR021109   Peptidase_aspartic_dom_sf       
IPR008737   Peptidase_asp_put       
IPR005312   DUF1759       

SUPFAM

SSF53098   SSF53098        + More
SSF57756   SSF57756       

Gene 3D

3.30.40.180     2.40.70.10    

ProteinModelPortal

H9IY77   A0A2A4JZ58   J9M897   A0A2A4JYS8   A0A2A4JY71   A0A1Y1JZB1   + More
J9M4P5   X1X0K7   D2A039   A0A2P8ZAL9   A0A3S2LM91   J9L7T1   X1XB84   A0A1Y1NI49   A0A2A4JPP6   J9KEP3   X1XMZ9   J9M6Y7   J9M9N1   A0A3S2TCD1   A0A3S2L9N1   J9LCP7   A0A3S2NSI9   J9KSA4   A0A1Y1KN14   X1WY51   X1X2A6   A0A1Y1KI01   A0A1Y1KFJ5  

PDB

2D8R     E-value=0.00415955,     Score=94

KEGG

101737771    K23209 DNA transposase THAP9 [EC:2.7.7.-] | (RefSeq) uncharacterized LOC101737771

GO

GO:0003677   GO:0004803   GO:0006313   GO:0003676   GO:0043565   GO:0046983   GO:0005839   GO:0051603   GO:0046835   GO:0006281   GO:0006259  

Length:

363

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0002

Exp number, first 60 AAs:

0

Total prob of N-in:

0.03104

outside

1  -  363

 

 

Pi

5.142742

Theta

15.345295

Tajima's D

-2.022634

CLR

1.81306

CSRT

0.0115994200289985

Interpretation

Uncertain