Gene
KWMTBOMO15897
Annotation
reverse_transcriptase_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 2.97
Sequence
CDS
ATGGAAGCTTTATTTACAGAATTCCTCCGACTTCGCCACCCTAAGCTCACTTCTGAGTTTCTGGCTTTCAAGGCCGATCACGCCGTGAGCCCTCTCGCGGATTTCGCCGTGCTCGTCGCTCCCGCGTCGTACACCGCAGCGTCCGCCATGCCTGCCGCTCCCGCGTCGCCTATACTAGTGGGTAAAACTGCTGCGTCGTCCGCCGTGACCGCCGCTCCCCTGGCGCGATCATCCGCGGGTTCCGCAGGGTCCGACGGACGTCCTGCATCTGCTCGTAGGTCGCCTGCTCCCGAGCCTGCTGCCTCCTCGTCCTCCGACTCTGACTCGGACATGGAGGTCGACCTCGCCCCCGCCTCATCGACGGATGGATTCACCCTGGTAAAGGGTAAGAAGCGCGCTGCGGAATCCCGAGCTCCCGCGGCCGCTAAAATTAGTAAAGCCGCGAACGCGTCGCGCCCTCGCCCTCCGACTCCCGTCGCTCCCCCTGCCCGTGCCACACCGTCGCCGCGTCCAGTGGCACAAAATAAAACTCAGACCCCTCCCCCGGTAATCCTTCAAGAGAAGGCAGCTTGGGACCGAGTTTCCCTGGCCCTTCAGGCCAAAAAAATTAATTTTATCAGCGCCCGTAACCTCGCGAATGGGATTCAAATTAAGGTAACGACACCCGACGACCATAGGGCCCTCTCAAGCTACCTCCGAAAGGAGCGTATAAGTTTCCACACTTATACGCTTCAGGAGGAGCGTGAACTTCGCGCGGTCATACGCGGCATCCCAAAGGAATTAGATGCCGATCTCGTCAAGGCCGACCTTCTAGAACAAGGTCTGCCGGTCAATTCCGTGCACCGCATGCACACAGGACGCGGGAGGGAGCCATACAATATGGTTCTCGTTGCTCTCCAGCCTACCCCCGAGGGCAAGCAAATTTTCAACGTACGAACAGTCTGTAGGCTTTCCGGAATAACCGTCGAAACCCCTCATAAAAAAGGCACTCCGAGCCAGTGCCATAACTGTCAGTTGTACGGGCACTCTTCCCGTAATTGCCACGCGCGCTCCCGATGCGTCAAGTGTTTGGGCGATCACGCCACGAGCCTTTGCACTCGCGATCAAAAAACCGCTACGGAACCGCCTAGCTGCGTCCTGTGCCGAACACAGGGTCACCCCGCGAATTACCGTGGTTGCCCCCGAGCCCCTAAAATAAATCGCCGCGTCGCCCGCCAAAACCGCCTCCGAGCTTTCGGCCCAGACATCAAAGCCACGGCACCCTCTGTGCCGAAGGCTAAGCCTGCTTTCGTGCCGGCGTCGGTGCCCAGCGTCTCGGCCTGGGCTAAACCGTTGCCGTACACGAACACGGCTACAACTCTCTCCCCCGCGACTCATCCCACCCCCGCGATACGTCCCTCCCCCGCGACTCGTCCCTCTCCCGCGACCTGCCCTCCGACCGCGTCCGACAATCTCGCTCTAGCAATCGACTTTTTTCAGTCGATCAACTTTGATCGCGTTAATGCTTTGGGCGACGCCATCCGCGCCGCCTCCACTGCACAACACTTTATCGCCGTTGTGCAAGAATACGCTGACGTATACGCGTCGTTAAATACGTGGAACTCTCACACCTCAACCCCTAATGGCAGGCGCCTCGACGCGTTAGTCGATGATCTCGCCTTCGATATCGTGGCTCCGCTGACCCCGACTCACTACCCGCTAAATATCGCGCATCGCCCGGATATACTCGACATAGCGTTATTAAAAAACGTAACTCTGCGCTTACATTCGATTGAAGTAGTTTCAGAGTTAGATTCAGACCATCGTCCCGTCATTATGAAACTCGGTCGCGCTCCCGATTCCGTTCCCGTCACGAGGACTGTGGTGGATTGGCACACGCTGGGCATCAGCCTGGCTGAATCTGATCCACCATCGCTCCCGTTTAGTCCGGACTCTATCCCGTCTCCTCAGGATACCGCTGAAGCCATAGACATCGTAACGTCACACATCACCTCGACATTAGATAGGTCATCCAAGCAAGTTGTAGCGGAGGACTTCCTTCACCGCTTCAAATTGCCCGACGATATTAGGGAACTTCTTAGAGCTAAGAACGCCTCGATCCGTGCGTACGATAGGTATCCTACCGCGGAAAATCGTATACGAATGCGTGCCCTACAACGCGACGTAAAGTCTCGCATCACCGAAGTCCGAGATGCCAGATGGTCTGATTTCTTAGAAGGACTCGCGCCCTCTCAAAGGTCTTACTACCGCTTAGCTCGTACTCTCAAATCGGATACGGTAGTAACTATGCCCCCCCTCGTAGGCCCCTCAGGCCGACTCGCGGCGTTCGATGATGACGAAAAAGCAGAGCTGCTGGCCGATACATTGCAAGCCCAGTGCATGCCCAGCATTCAATCCGCGGACCCTGTTCATGTAGAATTAGTAGACAGTGAGGTAGAACGCAGAGCCTCCTTGCCACCCTTGGACGCGTTACCGCCCGTCACCTCAATGGAAGTTAAAGACCTGATCAAAGACCTACGTCCTCGCAAGGCTCCCGGTTCCGACGGTATATCTAATCGCGTTATTAAACTTTTACCCGTCCAACTCATCGTGATGTTGGCATCTATTTTCAATGCCGCTATGGCTAACTGTATCTTTCCCACGGTGTGGAAAGAAGCGGACGTTATCGGCATACACAAACCCGGTAAACCAAAAAATAATCCGACGAGTTATCGCCCGATTAGCCTCCTCATGTCTCTAGGCAAACTATATGAGCGTCTGCTCTACAAACGCCTCAGAGATTTCGTCTCATCCAAGGGCATTCTCATCGATGAACAATTCGGATTCCGTGCAAATCACTCATGCGTACAACAGGTGCACCGCCTCACGGAGCACATTCTTGTGGGACTTAATCGACCAAAACCGTTATACACGGGAGCTCTCTTCTTCGACGTCGCAAAAGCGTTCGACAAAGTCTGGCACAACGGTTTGATTTTCAAACTATTCAACATGGGCGTGCCGGATAGTCTCGTGCTCATCATACGGGACTTCTTGTCGAACCGCTCTTTTCGATATCGAGTAGAGGGAACCCGCTCCTCCCCGCGACCACTCACGGCTGGAGTGCCGCAAGGCTCCGTTCTCTCACCGCTCTTATTTAGTTTATTTATTAATGATATTCCCCGGTCGCCGCCGACCCAGCTAGCCTTATTCGCTGACGACACAACCGTTTACTACTCAAGTAGAAACAAGTCCCTAATCGCGAGTAAACTCCAGAGCGCAGCGTTAGCCCTCGGACAGTGGTTCCGAAAATGGCGCATAGACATCAACCCGGCGAAAAGCACAGCAGTGTTATTTCAAAGGGGAAACTCACCGCTTATTTCCTCCCGCATTAGGAGGAGAAATATCACTCCCCCGATCACCCTCTTCGGCCAACCTATACCCTGGGTCAGGAAGGTTAAGTACCTGGGAGTCACCCTGGATGCATCCATGACATTCCGCCCACACATAAAAACAGTCCGCGACCGTGCCGCATTCATTCTCGGCAGACTCTATCCCATGATCTGTAAGCGGAGTAAAATGTCCCTTCGGAACAAGGTGACACTTTACAAAACTTGCATAAGGCCCATCATGACTTACGCGAGTGTGGTGTTCGCTCACGCGGCCCGCACACACATAGACACCCTCCAATCCCTACAATCTCGCTTTTGCAGGTTAGCCGTCGGGGCTCCGTGGTTCGTGAGGAACGTTGACCTACACGACGACCTGGGCCTTGAATCAATCCAGAAATACATGAAGTCAGCGTCGGAACGATACTTCGATAAGGCTATGCGTCATGATAATCGCCTTATCGTTGCCGCCGCTGACTACGCACCGAATCCTGATCATGCAGGAGCCAGTCACCGTCGACGCCCTAGACACGTCCTTACGGATCCATCAGATCCAATAACCTTTGCATTAGATGCCTTCAGCTCTAATACTAGGAGCAGGCTTAGGGACCCCAGTGACCGTACTCGTCGAACTCGACAAAGAGGTCGACGTGCAACCTAG
Protein
MEALFTEFLRLRHPKLTSEFLAFKADHAVSPLADFAVLVAPASYTAASAMPAAPASPILVGKTAASSAVTAAPLARSSAGSAGSDGRPASARRSPAPEPAASSSSDSDSDMEVDLAPASSTDGFTLVKGKKRAAESRAPAAAKISKAANASRPRPPTPVAPPARATPSPRPVAQNKTQTPPPVILQEKAAWDRVSLALQAKKINFISARNLANGIQIKVTTPDDHRALSSYLRKERISFHTYTLQEERELRAVIRGIPKELDADLVKADLLEQGLPVNSVHRMHTGRGREPYNMVLVALQPTPEGKQIFNVRTVCRLSGITVETPHKKGTPSQCHNCQLYGHSSRNCHARSRCVKCLGDHATSLCTRDQKTATEPPSCVLCRTQGHPANYRGCPRAPKINRRVARQNRLRAFGPDIKATAPSVPKAKPAFVPASVPSVSAWAKPLPYTNTATTLSPATHPTPAIRPSPATRPSPATCPPTASDNLALAIDFFQSINFDRVNALGDAIRAASTAQHFIAVVQEYADVYASLNTWNSHTSTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVIMKLGRAPDSVPVTRTVVDWHTLGISLAESDPPSLPFSPDSIPSPQDTAEAIDIVTSHITSTLDRSSKQVVAEDFLHRFKLPDDIRELLRAKNASIRAYDRYPTAENRIRMRALQRDVKSRITEVRDARWSDFLEGLAPSQRSYYRLARTLKSDTVVTMPPLVGPSGRLAAFDDDEKAELLADTLQAQCMPSIQSADPVHVELVDSEVERRASLPPLDALPPVTSMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPTVWKEADVIGIHKPGKPKNNPTSYRPISLLMSLGKLYERLLYKRLRDFVSSKGILIDEQFGFRANHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGSVLSPLLFSLFINDIPRSPPTQLALFADDTTVYYSSRNKSLIASKLQSAALALGQWFRKWRIDINPAKSTAVLFQRGNSPLISSRIRRRNITPPITLFGQPIPWVRKVKYLGVTLDASMTFRPHIKTVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPIMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMKSASERYFDKAMRHDNRLIVAAADYAPNPDHAGASHRRRPRHVLTDPSDPITFALDAFSSNTRSRLRDPSDRTRRTRQRGRRAT
Summary
EMBL
Proteomes
Interpro
SUPFAM
SSF56219
SSF56219
Gene 3D
PDB
6AR3
E-value=0.0375948,
Score=92
Ontologies
GO
Topology
Length:
1341
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.61552
Exp number, first 60 AAs:
0.03185
Total prob of N-in:
0.00147
outside
1 - 1341
Population Genetic Test Statistics
Pi
0
Theta
0
Tajima's D
0
CLR
0.36667
CSRT
0
Interpretation
Uncertain
