Gene

KWMTBOMO15602

Pre Gene Modal

BGIBMGA010721

Annotation

PREDICTED:_zinc_finger_protein_391-like_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr26(-):3876620-3883708      View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 4.77

CDS

ATGGATTGGCAATCAACGTGTCGTGTATGTCTAGAAAGTGGAGAAGCCGTTTCTCTATTTGATTTAGATGAAAACGACCAACAGTTCAGTGAAAAATACAAATTTTGCTGCAGCATAGAGATTAACGAAGACGATCTATTACCTACGTTAATATGCTTAAATTGTGTGGACAAGTTAATAAATGCATATGAATTCAAGCAACAATGTCTTACATCGAACCAAATGCTTCAAGAGTGCGTAGAGGAGTACAAAAAGTCTGTAGATTCTGCAGAAGAGAACATGAAAGATGAGTTAGATGATCTAAGCACAAAACAAGAGAATGGTATCCTGTATCAATATGAACTACCGATAGAACAGGACAGTGATGGCCAGTGGACTCGGACACTAGTGAAGACTCCCAGTAGTTCAGTTGTGACCAAAGCCTTGGGTCCAAGAAAGAGAGGGCGACCAAGGAAATATCCTAATGAACAAGGACAAATTGATGTTTCACCGTATCAGCGGAAGAAACCCAAACCACATAATCCTGAACCTGAGGCAATAACAACTATGATAGCAAAAGGCTCTTTGAATATAAAAGAAGAACCTTTCGAGGAGGAAGAAGACCTGTTCACTGAAAATTCGAACGATTGTGATGATCCAGATTTTGACCCAAATACAGCACCTGAGTCTCTCCTTGAAAAGCCAGCCGCACACAAAAAATACGGCAGAGCACGCAGAACGCAAGGCTCTCCGAACGAGGATCTGTTGTTGAGCGAGACCATATCGGCGAACACGCAGCCTCTGTCTGAAGACGTCACGGAGCCCCGGAAGAAACCGGCCCCGAGAAAAAAATACGTATACGGAAAGACACACAAGTGCGAGACGTGCGGCAGCTCGTTCACATCCAACGCGTCGCTGCAAGCGCACGTGCGGAGACACCTCGGGATCAAACCCTTCGTCTGCAGTGTGTGCGGGTACGCGTGCGTGCTGCGCATGGAGTTGCGGCGCCACATGATGCGGCACACCGGCGTGCGCCCCTACAAGTGCCGCGTGTGCGACCGCAGGTTCGGCGACTTCGGCAGCAGGCAGAAGCACGAGAGGTTGCACTTGGGCATCAGGCCGTACGAGTGTCCGCAGTGCGGCAAGTCGTTCACGTACTCATACGTGCTCACGAACCACCTGCTCACCCACACCGGCGAGAAGAACTTTGCGTAA

Protein

MDWQSTCRVCLESGEAVSLFDLDENDQQFSEKYKFCCSIEINEDDLLPTLICLNCVDKLINAYEFKQQCLTSNQMLQECVEEYKKSVDSAEENMKDELDDLSTKQENGILYQYELPIEQDSDGQWTRTLVKTPSSSVVTKALGPRKRGRPRKYPNEQGQIDVSPYQRKKPKPHNPEPEAITTMIAKGSLNIKEEPFEEEEDLFTENSNDCDDPDFDPNTAPESLLEKPAAHKKYGRARRTQGSPNEDLLLSETISANTQPLSEDVTEPRKKPAPRKKYVYGKTHKCETCGSSFTSNASLQAHVRRHLGIKPFVCSVCGYACVLRMELRRHMMRHTGVRPYKCRVCDRRFGDFGSRQKHERLHLGIRPYECPQCGKSFTYSYVLTNHLLTHTGEKNFA

Uniprot

H9JMG8   A0A3S2NN54   A0A2A4JFI7   A0A1E1WM26   S4PJZ7   A0A2H1VWM7   + More
A0A194PL42   A0A212EYK4   H9JMG7   A0A194RP43   A0A182Q285   Q16JJ0   A0A182T482   A0A182KWU8   Q5TSP8   A0A182UGH5   A0A182HJN0   A0A182VGM9   A0A3B0JQ61   W8CCL2   A0A1A9Z853   A0A3B0KKM9   A0A0K8UNM5   A0A0K8WCQ4   B3M0Y9   B4K561   A0A0K8U971   A0A3B0JQ63   B4GF03   B4JGY6   Q296L3   A0A0A1XCU6   A0A1W4VWY8   B4M0L1   B3MZ28  

Pubmed

19121390    23622113    26354079    22118469    17510324    20966253    + More
12364791    14747013    17210077    24495485    17994087    15632085    25830018   

EMBL

BABH01016826    RSAL01000221    RVE44067.1    NWSH01001646    PCG70579.1    GDQN01003077    + More
JAT87977.1    GAIX01004750    JAA87810.1    ODYU01004853    SOQ45156.1    KQ459601    KPI93718.1    AGBW02011486    OWR46572.1    KQ459875    KPJ19613.1    AXCN02000300    CH478007    EAT34435.1    AAAB01008904    EAL40439.4    APCN01002192    OUUW01000008    SPP84334.1    GAMC01003501    JAC03055.1    SPP84338.1    GDHF01024354    JAI27960.1    GDHF01003500    JAI48814.1    CH902617    EDV43218.1    CH933806    EDW15061.2    GDHF01029176    GDHF01028144    JAI23138.1    JAI24170.1    SPP84337.1    CH479182    EDW34188.1    CH916369    EDV93764.1    CM000070    EAL28444.2    GBXI01006014    JAD08278.1    CH940650    EDW68390.2    CH902632    EDV32872.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053268    UP000007151    UP000053240    + More
UP000075886    UP000008820    UP000075901    UP000075882    UP000007062    UP000075902    UP000075840    UP000075903    UP000268350    UP000092445    UP000007801    UP000009192    UP000008744    UP000001070    UP000001819    UP000192221    UP000008792   

PRIDE

H9JMG8    H9JMG7   

Pfam

PF00096   zf-C2H2        + More
PF07776   zf-AD
PF02178   AT_hook

Interpro

IPR039705   REPIN1        + More
IPR036236   Znf_C2H2_sf       
IPR013087   Znf_C2H2_type       
IPR017956   AT_hook_DNA-bd_motif       
IPR012934   Znf_AD       

SUPFAM

SSF57667   SSF57667       

ProteinModelPortal

H9JMG8   A0A3S2NN54   A0A2A4JFI7   A0A1E1WM26   S4PJZ7   A0A2H1VWM7   + More
A0A194PL42   A0A212EYK4   H9JMG7   A0A194RP43   A0A182Q285   Q16JJ0   A0A182T482   A0A182KWU8   Q5TSP8   A0A182UGH5   A0A182HJN0   A0A182VGM9   A0A3B0JQ61   W8CCL2   A0A1A9Z853   A0A3B0KKM9   A0A0K8UNM5   A0A0K8WCQ4   B3M0Y9   B4K561   A0A0K8U971   A0A3B0JQ63   B4GF03   B4JGY6   Q296L3   A0A0A1XCU6   A0A1W4VWY8   B4M0L1   B3MZ28  

PDB

2I13     E-value=2.73138e-18,     Score=226

KEGG

101741034    no KO assigned | (RefSeq) zinc finger protein 391-like

GO

GO:0003676   GO:0005634   GO:0003677   GO:0008270   GO:0046872   GO:0030126   GO:0030117   GO:0006418   GO:0003707   GO:0006281   GO:0006259  

PANTHER

PTHR24406:SF10  

Length:

397

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.60831

Exp number, first 60 AAs:

0.00015

Total prob of N-in:

0.04570

outside

1  -  397

 

 

Pi

183.667744

Theta

141.754954

Tajima's D

0.382695

CLR

0.135158

CSRT

0.48177591120444

Interpretation

Uncertain