Gene

KWMTBOMO15408

Pre Gene Modal

BGIBMGA004890

Annotation

PREDICTED:_steroid_hormone_receptor_ERR1-like_[Plutella_xylostella]

Location

Bomo_Chr25(+):11821478-11863521      View in EpiBrowser

Transcription factor

ESR-like

Location in the cell

Nuclear   Reliability : 3.78

CDS

ATGATGTCCGCAGTCAGTGGGGAGCCCATGCTACGCCGCGTCAAACAGGAAACGGATCCGTCGCCGCAGTACTCGCCCCCCGAGCCGCAGCCCCCACACCCCCAGCCGCTGCACCCCCGACCGATGCCCTTGATGCAGCCGGAGGTACCTATGCCTCTCCAACAGTTGGAACTCGAGACTAAGGACGTGAAGTTCTGCGTTTCGCCCGAGGACGGCACGATCGTGGGCAACACCAGCCCTGAGCAGCAGCACTGTTCGTCGACAACCGCGGCCGCCGCCAGCGGCAACCGGGACGAGGACACGCCGCGCAGGCGGTGCCTCGTCTGCGGGGACGTCGCCTCCGGCTTCCACTACGGAGTAGCCAGCTGCGAGGCTTGCAAGGCGTTCTTCAAGAGGACCATACAGGGCAACATCGACTACACTTGTCCGGCGGCGAATGAGTGCGAGATCAACAAGCGGCGGCGCAAGGCGTGCCAGGCGTGCCGCTTCCGCAAGTGCTTGCGCACCGGGATGCTGCGCGAGGGCGTGCGCCTGGACCGCGTGCGCGGCGGCCGCCAGAAGTACCGCCGCGCGCCCGAGCAGGCCCAGCCCAGGGTGCAGCTCGACGACATCAAGGTGCTGGAGGCGCTGCTCTCGTACGAGCCGGAGCCGTTCGCGTGCTCGGCGGCGCCCCCCGGCGTGACGGAGCCGGCCGCGCGGACGCTGGCGCTGCTCGCCGACCTGTACGACCGGGAGCTGGTCGAGATCATCGGCTGGGCCAAGCAGATACCCGGCTTCACGGACCTGCAGCTCAACGATCAGATGCGCTTGTTACAAAGCACTTGGGCCGAGATGCTGAGTCTCATGGTGGCGTACCGCTCGATGTCCAGCGGCGCCAACCTCAAGCTGCGGTTCGCTTCGGACCTCACGCTGGACGAGCAGGAGGCCCGCGACATCGGGGCCACCGATCTGTTTCTACAGGTGTCGGGCGTGGTGCGGCGGCTGGAGCGCGCGGGCGCCGTGCGCGAGGAGTGCGTGCTGCTGAAGGCGCTGGTGCTGGCCAACTCGGAGGCGCGCCTCGACGAGCACCTCACGCTGCGCCGCTTCCGCGAGCAGATCCTGCAGGCGCTCAACGAGGCCGTCGCCGTGCTGCGGTTAGTGACCCACACACACACAGACGTGACGTCATTTGAGGCTATTCGCGCGACGCTATGCTGTCGTGCGTTATGA

Protein

MMSAVSGEPMLRRVKQETDPSPQYSPPEPQPPHPQPLHPRPMPLMQPEVPMPLQQLELETKDVKFCVSPEDGTIVGNTSPEQQHCSSTTAAAASGNRDEDTPRRRCLVCGDVASGFHYGVASCEACKAFFKRTIQGNIDYTCPAANECEINKRRRKACQACRFRKCLRTGMLREGVRLDRVRGGRQKYRRAPEQAQPRVQLDDIKVLEALLSYEPEPFACSAAPPGVTEPAARTLALLADLYDRELVEIIGWAKQIPGFTDLQLNDQMRLLQSTWAEMLSLMVAYRSMSSGANLKLRFASDLTLDEQEARDIGATDLFLQVSGVVRRLERAGAVREECVLLKALVLANSEARLDEHLTLRRFREQILQALNEAVAVLRLVTHTHTDVTSFEAIRATLCCRAL

Similarity

Belongs to the nuclear hormone receptor family.
Belongs to the nuclear hormone receptor family. NR3 subfamily.

Uniprot

A0A1B1M0R7   A0A2A4JYX1   A0A2A4K0Q3   A0A2H1V335   A0A1I9RYC3   A0A3S2NSI7   + More
A0A2W1BIB8   A0A212FQ16   A0A0N0PBA0   A0A194QDI5   A0A0U2S7G3   A0A0L7LNK9   D6WU20   A0A139WFK8   A0A1Y1L3V2   A0A1Y1L2Q4   A0A2J7QLP3   U4U3T1   A0A1W4X7V6   N6UKY6   A0A1W4WYG7   A0A067QT68   A0A2P8YW51   A0A1S5UZQ5   A0A223HFU7   A0A1D9C6F9   A0A221C9P7   A0A346TJJ9   A0A1B6JZQ2   D2Y1A7   A0A1B6JJE4   A0A097C257   E0VYP3   F4WPT4   A0A226EV34   D1LUZ3   A0A1B6MIK9   A0A1B6MNL6   E2BSJ6   A0A0A9VSR2   C1I1I1   A0A195EH28   A0A1S4FZE4   A0A1J1ITD3   Q16IU3   A0A0J7KHQ3   A0A195CKQ9   A0A0A9Y8J4   A0A151WJS5   A0A0V0GD90   A0A1D2NKF5   A0A0C9RQH6   A0A069DUC1   A0A158NI98   A0A1I9J8G2   C4MBZ4   A0A195AX26   K7J6M1   U5EWZ8   A0A026WWP8   D8L549   B0WYX7   A0A0L7R722   A0A195F662   A0A088A026   A0A131XRQ5   A0A0N0BJF8   A0A1Q3FYJ5   A0A1Q3FYV5   A0A1Q3FYM6   A0A224XJD6   A0A0A9YA46   A0A087U0Z5   A0A0A9VQS0   A0A1B0GMR7   A0A0A7CJW0   A0A0A7CK37   T1IPY4   A0A1L8DH32   A0A1Z5L1L1   A0A1L8DKI4   E2B1G4   A0A336KLY2   A0A1E1XJQ8   A0A2R5LLU9   E3W3U3   A0A0P5C7Q2   A0A0P5C7F6   A0A131YGL7   L7LXI7   A0A1E1X399   A0A0P5C7H7   A0A0P6ASE0   A0A0P5GAA9   A0A0N8EGQ2   A0A0P5SRZ1   A0A0P6BCV6   T1GCB1   A0A0P5RRU2  

Pubmed

28756777    22118469    26354079    26227816    18362917    19820115    + More
28004739    23537049    24845553    29403074    29707750    20566863    21719571    20304459    20798317    25401762    26823975    17510324    27289101    26334808    21347285    20075255    24508170    29652888    25407996    28528879    29209593    26830274    25576852    28503490   

EMBL

KT268294    ANS60466.1    NWSH01000346    PCG77221.1    PCG77222.1    ODYU01000450    + More
SOQ35255.1    KT944662    AOZ56905.1    RSAL01000001    RVE55258.1    KZ150138    PZC72967.1    AGBW02000323    OWR55793.1    KQ460973    KPJ10088.1    KQ459324    KPJ01521.1    KU301327    ALT07179.1    JTDY01000450    KOB77123.1    KQ971352    EFA07462.2    KYB26704.1    GEZM01068290    JAV67040.1    GEZM01068289    JAV67041.1    NEVH01013243    PNF29496.1    KB631985    ERL87717.1    APGK01019570    KB740112    ENN81341.1    KK853567    KDR06670.1    PYGN01000325    PSN48477.1    KX373870    AQN67829.1    KX431895    AST48089.1    KU899089    AOY10609.1    KY210878    ASL70079.1    MF537045    AXU37748.1    GECU01003034    JAT04673.1    GU290313    ADB43256.1    GECU01008401    JAS99305.1    KM189915    AIS76179.1    DS235845    EEB18499.1    GL888255    EGI63763.1    LNIX01000002    OXA60934.1    GU070740    ACY66850.1    GEBQ01004211    JAT35766.1    GEBQ01002518    JAT37459.1    GL450240    EFN81329.1    GBHO01044835    GBHO01021855    GBHO01021854    GBRD01009378    GDHC01006753    JAF98768.1    JAG21749.1    JAG21750.1    JAG56446.1    JAQ11876.1    EF474463    ABR88112.1    KQ978957    KYN27174.1    CVRI01000059    CRL02986.1    CH478052    EAT34188.1    LBMM01007381    KMQ89782.1    KQ977622    KYN01293.1    GBHO01015126    GBHO01015125    GBHO01015124    GDHC01021143    JAG28478.1    JAG28479.1    JAG28480.1    JAP97485.1    KQ983039    KYQ48084.1    GECL01000227    JAP05897.1    LJIJ01000018    ODN05709.1    GBYB01009471    GBYB01009472    JAG79238.1    JAG79239.1    GBGD01001582    JAC87307.1    ADTU01016132    ADTU01016133    ADTU01016134    ADTU01016135    KP398511    AKQ06251.1    EF506198    ABS50436.1    KQ976725    KYM76514.1    AAZX01007930    GANO01000318    JAB59553.1    KK107078    EZA60253.1    FJ770332    ACW84414.1    DS232200    EDS37237.1    KQ414643    KOC66682.1    KQ981763    KYN36080.1    GEFM01005823    GEGO01002978    JAP69973.1    JAR92426.1    KQ435719    KOX78864.1    GFDL01002401    JAV32644.1    GFDL01002393    JAV32652.1    GFDL01002394    JAV32651.1    GFTR01005262    JAW11164.1    GBHO01015128    GBHO01015118    GBHO01015117    JAG28476.1    JAG28486.1    JAG28487.1    KK117641    KFM71034.1    GBHO01044822    GBHO01021856    GBHO01015122    JAF98781.1    JAG21748.1    JAG28482.1    AJVK01026433    KJ664215    AID52852.1    KJ664216    AID52853.1    JH431265    GFDF01008353    JAV05731.1    GFJQ02006006    JAW00964.1    GFDF01007118    JAV06966.1    GL444918    EFN60472.1    UFQS01000437    UFQT01000437    SSX03933.1    SSX24298.1    GFAA01003956    JAT99478.1    GGLE01006282    MBY10408.1    HQ386702    ADO51071.1    GDIP01174371    JAJ49031.1    GDIP01174372    JAJ49030.1    GEDV01010123    JAP78434.1    GACK01008732    JAA56302.1    GFAC01005461    JAT93727.1    GDIP01174370    JAJ49032.1    GDIP01039058    LRGB01000337    JAM64657.1    KZS19653.1    GDIQ01245247    JAK06478.1    GDIQ01028452    JAN66285.1    GDIP01136170    JAL67544.1    GDIP01017011    JAM86704.1    CAQQ02186414    CAQQ02186415    GDIQ01102741    JAL48985.1   

Proteomes

UP000218220    UP000283053    UP000007151    UP000053240    UP000053268    UP000037510    + More
UP000007266    UP000235965    UP000030742    UP000192223    UP000019118    UP000027135    UP000245037    UP000009046    UP000007755    UP000198287    UP000008237    UP000078492    UP000183832    UP000008820    UP000036403    UP000078542    UP000075809    UP000094527    UP000005205    UP000078540    UP000002358    UP000053097    UP000002320    UP000053825    UP000078541    UP000005203    UP000053105    UP000054359    UP000092462    UP000000311    UP000076858    UP000015102   

Pfam

PF00104   Hormone_recep        + More
PF00105   zf-C4

Interpro

IPR013088   Znf_NHR/GATA        + More
IPR000536   Nucl_hrmn_rcpt_lig-bd       
IPR001628   Znf_hrmn_rcpt       
IPR035500   NHR-like_dom_sf       
IPR001723   Nuclear_hrmn_rcpt       
IPR024178   Oest_rcpt/oest-rel_rcp       
IPR027289   Oest-rel_rcp       

SUPFAM

SSF48508   SSF48508       

Gene 3D

1.10.565.10     3.30.50.10    

ProteinModelPortal

A0A1B1M0R7   A0A2A4JYX1   A0A2A4K0Q3   A0A2H1V335   A0A1I9RYC3   A0A3S2NSI7   + More
A0A2W1BIB8   A0A212FQ16   A0A0N0PBA0   A0A194QDI5   A0A0U2S7G3   A0A0L7LNK9   D6WU20   A0A139WFK8   A0A1Y1L3V2   A0A1Y1L2Q4   A0A2J7QLP3   U4U3T1   A0A1W4X7V6   N6UKY6   A0A1W4WYG7   A0A067QT68   A0A2P8YW51   A0A1S5UZQ5   A0A223HFU7   A0A1D9C6F9   A0A221C9P7   A0A346TJJ9   A0A1B6JZQ2   D2Y1A7   A0A1B6JJE4   A0A097C257   E0VYP3   F4WPT4   A0A226EV34   D1LUZ3   A0A1B6MIK9   A0A1B6MNL6   E2BSJ6   A0A0A9VSR2   C1I1I1   A0A195EH28   A0A1S4FZE4   A0A1J1ITD3   Q16IU3   A0A0J7KHQ3   A0A195CKQ9   A0A0A9Y8J4   A0A151WJS5   A0A0V0GD90   A0A1D2NKF5   A0A0C9RQH6   A0A069DUC1   A0A158NI98   A0A1I9J8G2   C4MBZ4   A0A195AX26   K7J6M1   U5EWZ8   A0A026WWP8   D8L549   B0WYX7   A0A0L7R722   A0A195F662   A0A088A026   A0A131XRQ5   A0A0N0BJF8   A0A1Q3FYJ5   A0A1Q3FYV5   A0A1Q3FYM6   A0A224XJD6   A0A0A9YA46   A0A087U0Z5   A0A0A9VQS0   A0A1B0GMR7   A0A0A7CJW0   A0A0A7CK37   T1IPY4   A0A1L8DH32   A0A1Z5L1L1   A0A1L8DKI4   E2B1G4   A0A336KLY2   A0A1E1XJQ8   A0A2R5LLU9   E3W3U3   A0A0P5C7Q2   A0A0P5C7F6   A0A131YGL7   L7LXI7   A0A1E1X399   A0A0P5C7H7   A0A0P6ASE0   A0A0P5GAA9   A0A0N8EGQ2   A0A0P5SRZ1   A0A0P6BCV6   T1GCB1   A0A0P5RRU2  

PDB

1LO1     E-value=9.55176e-40,     Score=411

KEGG

101742160    K08703 estrogen-related receptor ERR | (RefSeq) steroid hormone receptor ERR1

GO

GO:0008270   GO:0003700   GO:0005634   GO:0003707   GO:0043565   GO:0046872   GO:0003677   GO:0005496   GO:0016021   GO:0006355   GO:0043401   GO:0006281   GO:0006259  

Subcellular location

Nucleus  

Length:

402

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00571999999999999

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00300

outside

1  -  402

 

 

Pi

196.785256

Theta

167.592214

Tajima's D

0.544447

CLR

0.446909

CSRT

0.525823708814559

Interpretation

Uncertain