Gene

KWMTBOMO15402

Pre Gene Modal

BGIBMGA004895

Annotation

PREDICTED:_protein_Fer3-like_[Amyelois_transitella]

Location

Bomo_Chr25(-):11757309-11758467      View in EpiBrowser

Transcription factor

bHLH

Location in the cell

Nuclear   Reliability : 3.195

CDS

ATGTTAGTTTGGTCGGCGGCTGGCTGTGGGCGCAGCGTCGCCCGCGCCACGCCGAGCAACAAGAAGCCGCGGCGGCGCGTGGCCTCCGTCGCGCAACGCCGCGCCGCCAACATACGGGAGCGACGCAGAATGTTCAACTTGAACGAGGCCTTCGACAAACTGCGTAGGAAGGTACCGACGTTTGCATACGAAAAACGTCTCTCTCGCATCGAGACCTTAAGGTTGGCGATTACGTACATAAGCTTCATGTGTGAGCTCTTGCACGGGTCGCCGCAACCTCACCACGGCCATTCTGCTATACATCCGCCAAGACTTTTCGACTCCGAGGTGACCTGGTGCGGCTGA

Protein

MLVWSAAGCGRSVARATPSNKKPRRRVASVAQRRAANIRERRRMFNLNEAFDKLRRKVPTFAYEKRLSRIETLRLAITYISFMCELLHGSPQPHHGHSAIHPPRLFDSEVTWCG

Uniprot

H9J5V5   A0A212FKK8   A0A2W1BEI3   A0A2A4JSD6   A0A194RL70   A0A2H1VI00   + More
D7ELX5   N6U7K7   A0A1B0GND7   A0A0K0PRS2   A0A194PI88   A0A1W4XF54   A0A1W4XPS4   B0WUK4   A0A2J7QUZ4   A0A2P8XVH3   A0A067QR29   A0A232F8U3   A0A2A3EC60   A0A087ZXL6   K7J3C0   A0A0L7R8M4   A0A154PJ40   A0A0N0BKY1  

Pubmed

19121390    22118469    28756777    26354079    18362917    19820115    + More
23537049    29403074    24845553    28648823    20075255   

EMBL

BABH01039885    BABH01039886    AGBW02008046    OWR54229.1    KZ150159    PZC72741.1    + More
NWSH01000669    PCG74921.1    KQ460045    KPJ18065.1    ODYU01002670    SOQ40465.1    DS497942    EFA12438.1    APGK01036690    KB740941    ENN77645.1    AJVK01029346    KP641324    AKQ48966.1    KQ459604    KPI92439.1    DS232107    EDS34989.1    NEVH01010480    PNF32387.1    PYGN01001283    PSN36012.1    KK853123    KDR11069.1    NNAY01000679    OXU27022.1    KZ288288    PBC29325.1    KQ414631    KOC67232.1    KQ434931    KZC11837.1    KQ435689    KOX81242.1   

Proteomes

UP000005204    UP000007151    UP000218220    UP000053240    UP000007266    UP000019118    + More
UP000092462    UP000053268    UP000192223    UP000002320    UP000235965    UP000245037    UP000027135    UP000215335    UP000242457    UP000005203    UP000002358    UP000053825    UP000076502    UP000053105   

PRIDE

H9J5V5   

Pfam

PF00010   HLH        + More
PF12269   zf-CpG_bind_C
PF02958   EcKinase

Interpro

IPR036638   HLH_DNA-bd_sf        + More
IPR011598   bHLH_dom       
IPR022056   CpG-bd_C       
IPR037869   Spp1/CFP1       
IPR004119   EcKinase-like       
IPR011009   Kinase-like_dom_sf       

SUPFAM

SSF47459   SSF47459        + More
SSF56112   SSF56112       

Gene 3D

4.10.280.10    

CDD

cd00083  HLH

ProteinModelPortal

H9J5V5   A0A212FKK8   A0A2W1BEI3   A0A2A4JSD6   A0A194RL70   A0A2H1VI00   + More
D7ELX5   N6U7K7   A0A1B0GND7   A0A0K0PRS2   A0A194PI88   A0A1W4XF54   A0A1W4XPS4   B0WUK4   A0A2J7QUZ4   A0A2P8XVH3   A0A067QR29   A0A232F8U3   A0A2A3EC60   A0A087ZXL6   K7J3C0   A0A0L7R8M4   A0A154PJ40   A0A0N0BKY1  

PDB

2YPB     E-value=2.16463e-05,     Score=107

KEGG

101742020    K22400 Fer3-like protein | (RefSeq) protein Fer3

GO

GO:0046983   GO:0048188   GO:0045322   GO:0016301   GO:0003676   GO:0043565   GO:0008134   GO:0019904   GO:0003697   GO:0008094   GO:0005524   GO:0006281   GO:0006259  

PANTHER

PTHR46174  

Length:

114

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.09943

Exp number, first 60 AAs:

0.00014

Total prob of N-in:

0.10300

outside

1  -  114

 

 

Pi

285.173087

Theta

139.053653

Tajima's D

2.647713

CLR

1.26083

CSRT

0.955502224888756

Interpretation

Uncertain