Silkworm Genome Informatics Database

Gene

KWMTBOMO15368

Pre Gene Modal

BGIBMGA005083

Annotation

PREDICTED:_homeobox_protein_prospero_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr25(+):10530617-10558250 View in EpiBrowser

Transcription factor

HPD

Location in the cell

Nuclear Reliability : 4.39

CDS

ATGTCATCGGAGGAGGAGGCCGACTCTCACGCGCCCTACTCGGATAAACTACTAAGGAAACAGAAACGCGCCAGACAGCGCGTGGACGCCGGCGAGCCGCGCAATTCTTACTCGACTCTCGCGACGAACGGAATCGCGCCCGCGCGCGCCGCACTCATGAGTGGTGGACTATACAGCGCCATCTTCGAGGGCCGCCAACACTTCGGCCTCTTCGGACCGGGATACGCGCCGGCCGAAATGTTGAACGAACTTCTCGGACGAACAACAAAACAAGACGACAACGGAGACGAAGCGAACGGCGGCGTGATCGCGCACCGGGTCCTCAGAGACATCCTACAGAGCCGCAATAAAGAGTTACTGCTCTCCTCGGATAACAACAACGTACTAGCAAATAACAACAATGACGAACCGAAAACAGAGAAACGATCACCGGAACGACCCTGCTCGCACGACTCACGGCCGGACCTGGACAACGCCCTCCTCTCGCTCGAAAATCCCGGGAACTCACACGCGTCTCCGCCTCCAGCTCCTCCGTCTTCAGAGAACTTAATCGCTCCTAAGCCTGAACCAGAAGATCGTGATAGTGATGCTCAACGCTCCTCCCCCAGACCCTTAGATGTAAAACGTGCTCGTGTTGAAAATATAGTGTCTACGATGCGGTCGAGTCCTGCGCCGCAACAACCACAGGTAAATGGCTGCAAGAAACGGAAGCTGTATCATCCGCAGCAGCACGACGGTGCAGCGGAGCGCTACGGTACCAGCCACAGCAGCAGCACCCACACGGTCTCAGACGACTCGGAGGATGACGGTGAGCGACCACCCATACAACAAAAATTAGTAGAAAAAAATGCACTCAAATCACAACTTAGAACTTTGCAAGAGCAGTTAGCTGAGATGCACGAAAAATATGTGCAACTATGCAATAGAGTAGGGAAGGAGTCTGAGACAGTCGATAACGACGGTGCTTCCAGTGATGTAGAACAAATCGAAGAGTCGATCCCGAAATCCGAACCCGCATCTCCGGCCAAAGAATTACCGCCGCCTCTAACAAATACAGCTACACCAAAGATGTTTTCTCAAGTGATGAACCAAATGATGACCGCAAAGATGCACGCGCAGGCAGTAGGACACCCACACCTTCAGCCAGGATTTAACGGAACGCTACCTATGATGCCGCATTTGCCACCAACAGATCATATGCATCCGCCTCATCCTCAAATACATCTTAATAGCGCGGCAGCCATGTATCTAAATGTCAGCCAAAAATTGTTCTTAGAACAGGAAGCCAGAATAAAAGAAGCTGCTGAGCAACAACAAAACAATCAGCAAATAAGACCTCAGTCTAACCAACATTCGCCGCAGCAGAGGCAACTTGGACCGACGCCGAAACCACCTCTCTCATCTGAGCTGGCTGAACGATTGGATGCTTTACGGGTCAACACAGGATCTGTTGGTCCCATCTCCGGGGCTGACCTTGAGGGCTTAGCAGATGTATTGAAAAATGAAATCACAGCTTCGCTTGCAACACTTATCGACTCTATCGTCACACGTTTCGTGCACCAGCGACGTGTTCTGGGGAAGCAGTCTGAAGCGGCATCGGCAGCGGCAGACAAACTGAACAAGGATTTGATGCGAGCTGCACGGCTCATTGATAGAAAGTCGCCAACGCCCAAGCCTCCGGAGAGACAGATGCCAGGCATGTTCCAGACGCCGCCAAAACCGTTCGGGCCTCTATACGGGCCGATGAACGGCCAGTTCGAGAGGGAATTGAACCCCGAACAGAGCGAAGCAATCAGCCTCGTCGTCCCATCGAGGAAGAAACGACATAAGGTCACCGACACACGCATCACGCCGAGGACCGTGAGTCGAATACTGGGGGAGGGCGTCAGGCAGTCCCCGGAGAGCAAATTCCCGGAATCGCCGTCACCGCGGCCTTACACAGGATTACCAACCGCAGTGGCGATACCGAACCCATCGCTGCACGAGAGCCAAGTATTCTCTCCGTATTCTCCTTTCTTCGGCGCGGGGGGCGGACTGGCGCGGTCGCCACCTGCAGCCCCGGAGCGGGAGTCCCCGCCGTTGCCTCACGCGCCCGTGCTGCACCACTCAGAGCTGCTGATGAGTGCGCATCACTCCTCGCCCGATTACCTGCGCCAACATGCCCGCATGCACGCCAGCGCGTTGCACCAATCCCAGATGATGATGGACGGGCAGGACCCACATTCCGACTGCAACTCCACAGACCTGCCCTACGACGGAGTTCAGCCTACTTCCTCAACGCTAACGCCGATGCACCTGCGCAAAGCGAAGCTCATGTTCTTCTGGGTCCGGTATCCGAGCTCAGCCGTCCTCAAGATGTACTTCCCCGACATCAAGTTTAACAAGAACAACACAGCGCAGCTCGTCAAATGGTTCTCGAACTTCCGAGAGTTCTACTACATCCAAATGGAGAAGTACGCTCGGCAAGCGATCAGCGAAGGTCTGAAGGCGGCCGAGGACCTGCATGTTGCCGGTGACTCTGAACTTTACAGAGTCCTCAACTTGCATTACAACAGAAATAACCACATCGAGGTACCTTCGAACTTCAGATATGTGGTTGAGCAGACTCTGCGCGAGTTCTTCCGCGCGATCCAAGGCGGGAAGGACGCCGAGCAGAGCTGGAAGAAGTCGATCTACAAGGTGATCTCGCGGCTCGACGACCCCGTGCCCGAGTACTTCAAGTCGCCGAACTTTCTCGAACAGTTGGAGTGA

Protein

MSSEEEADSHAPYSDKLLRKQKRARQRVDAGEPRNSYSTLATNGIAPARAALMSGGLYSAIFEGRQHFGLFGPGYAPAEMLNELLGRTTKQDDNGDEANGGVIAHRVLRDILQSRNKELLLSSDNNNVLANNNNDEPKTEKRSPERPCSHDSRPDLDNALLSLENPGNSHASPPPAPPSSENLIAPKPEPEDRDSDAQRSSPRPLDVKRARVENIVSTMRSSPAPQQPQVNGCKKRKLYHPQQHDGAAERYGTSHSSSTHTVSDDSEDDGERPPIQQKLVEKNALKSQLRTLQEQLAEMHEKYVQLCNRVGKESETVDNDGASSDVEQIEESIPKSEPASPAKELPPPLTNTATPKMFSQVMNQMMTAKMHAQAVGHPHLQPGFNGTLPMMPHLPPTDHMHPPHPQIHLNSAAAMYLNVSQKLFLEQEARIKEAAEQQQNNQQIRPQSNQHSPQQRQLGPTPKPPLSSELAERLDALRVNTGSVGPISGADLEGLADVLKNEITASLATLIDSIVTRFVHQRRVLGKQSEAASAAADKLNKDLMRAARLIDRKSPTPKPPERQMPGMFQTPPKPFGPLYGPMNGQFERELNPEQSEAISLVVPSRKKRHKVTDTRITPRTVSRILGEGVRQSPESKFPESPSPRPYTGLPTAVAIPNPSLHESQVFSPYSPFFGAGGGLARSPPAAPERESPPLPHAPVLHHSELLMSAHHSSPDYLRQHARMHASALHQSQMMMDGQDPHSDCNSTDLPYDGVQPTSSTLTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFNKNNTAQLVKWFSNFREFYYIQMEKYARQAISEGLKAAEDLHVAGDSELYRVLNLHYNRNNHIEVPSNFRYVVEQTLREFFRAIQGGKDAEQSWKKSIYKVISRLDDPVPEYFKSPNFLEQLE

Uniprot

A0A2A4JQN6 H9J6E1 A0A3S2NNV0 A0A2W1BGW6 A0A212F3M4 A0A194Q7V0 + More
A0A194RKG6 D6WUC4 Q17H88 A0A336MW69 A0A1W4WSD1 N6U2S2 U4U3E1 U4TTP2

Pubmed

19121390 28756777 22118469 26354079 18362917 19820115 + More
17510324 23537049

EMBL

NWSH01000771 PCG74311.1 BABH01019700 RSAL01000193 RVE44615.1 KZ150186 + More
PZC72457.1 AGBW02010531 OWR48337.1 KQ459324 KPJ01469.1 KQ460045 KPJ18032.1 KQ971352 EFA07555.2 CH477252 EAT46002.1 UFQT01002396 SSX33359.1 APGK01052080 APGK01052081 APGK01052082 APGK01052083 KB741208 ENN72867.1 KB631590 ERL84505.1 KB631185 ERL84152.1

Proteomes

UP000218220 UP000005204 UP000283053 UP000007151 UP000053268 UP000053240 + More
UP000007266 UP000008820 UP000192223 UP000019118 UP000030742

PRIDE

H9J6E1

Pfam

PF05044 HPD

Interpro

IPR023082   Homeo_prospero_dom        + More
IPR009057   Homeobox-like_sf
IPR039350   Prospero_homeodomain
IPR037131   Homeo_prospero_dom_sf

SUPFAM

SSF46689 SSF46689

Gene 3D

1.10.10.500

ProteinModelPortal

A0A2A4JQN6 H9J6E1 A0A3S2NNV0 A0A2W1BGW6 A0A212F3M4 A0A194Q7V0 + More
A0A194RKG6 D6WUC4 Q17H88 A0A336MW69 A0A1W4WSD1 N6U2S2 U4U3E1 U4TTP2

PDB

1XPX E-value=1.92972e-83, Score=791

KEGG

100302610 K20211 prospero homeobox 1 | (RefSeq) Pros; prospero

PATHWAY

04013 MAPK signaling pathway - fly - Bombyx mori (domestic silkworm)

GO

GO:0006355 GO:0003677 GO:0005634 GO:0000122 GO:0045944 GO:0008270 GO:0005524 GO:0006418 GO:0004818 GO:0005737 GO:0006424 GO:0006412 GO:0016876 GO:0043039

PANTHER

PTHR12198

Length:

916

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.21879

Exp number, first 60 AAs:

0.17516

Total prob of N-in:

0.00918

outside

1 - 916

Pi

221.882648

Theta

182.953804

Tajima's D

0.355158

CLR

12.45151

CSRT

0.470026498675066

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics