Gene

KWMTBOMO14604

Pre Gene Modal

BGIBMGA008769

Annotation

PREDICTED:_zinc_finger_protein_221-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr24(+):11117324-11123678      View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 3.948

CDS

ATGACAACTTTGATGAAGACCGTAGGTATTAGGGCAGATGTTGAGTCAAATATCAAGGCAGAAGCTTCTAGATTGGATGACGTCACTGATATTACGTCACAACTCATTAAACAAAATTACGTGGGGAGATTGAGTGCAGAGATAAGAGAAGATTCTCAAAAAGACTGGTCGAAGATCGTGGAGAGGCGCGGCGACGGTCCCTTACTCCGCGAGAACTCCCTAAAACTGATATCAAATTCGACTCTCTGCGTGTTCCAGTGGAACAAAAGCCGCTACAGATGCTTCTGCTGTAAGGAGCCCTTTAGCGACATTGACCTGCTGAGGCAGCACACGGACAACGCTCATTCCATAAAAAATATAGAGAAAAAAATAATCGTCCAACAAAATAAACTAGTTAAAGTCGAAATCTCTAAGTTGAGTTGCAGGATGTGCGGGATTACAATGGATTCATTGTCAACGCTGAGGCGCCATCTTTCCGACGAGCACGCCATCTTGTTCGCGTCAGACGACGATTTACTCGTGCCGTTTAAACTGCAAAACGATTTGAAATGTCAAATATGTCACGAGAGATTTAGCGTTTTTCGTTTATTGAACATTCACGTGAACAAGCATTATAGGAAGCACGTGTGCCATGTTTGCGGCGCCGGCTTCACAAGTTTAGTCTTCTTGAATTTACACAGAACGAGGGCGCATCGTCCGCTGACTTGTAGGCAGTGTGACGCGACCTTCGTCACTAGAAACGATAAAAAGCAACATGAAATCAACGTGCACGGCTTGAAATGCGAACGGAAACTGCGTTTTCCGTGTCCGTATTGCGAGGACAGGTTCTATCAGGAGAACTTCCGCGTGCTTCACCTGGTCGAGAAGCACGGCTTCGCGAGACCGGAGCACAGGTGCGTGGTGTGCGCGAAAACTTTCGTCACCCGCAGCCTATTGAATAATCACACGAAAAACGTTCACAACAAAGAGAAGAATCACAAATGTGACATCTGTCAAAATTTGTTCTACACTAAGTCGGATCTGGGCAGGCACAGGGTCACGCACACGGGCGAACGAAAACACAATTGTGGTGTTTGTAACGCGAAATTCACGACGAAAGACTCGCTGAGGCGACACGCGAAAAGGGCTCACCCTGTATAG

Protein

MTTLMKTVGIRADVESNIKAEASRLDDVTDITSQLIKQNYVGRLSAEIREDSQKDWSKIVERRGDGPLLRENSLKLISNSTLCVFQWNKSRYRCFCCKEPFSDIDLLRQHTDNAHSIKNIEKKIIVQQNKLVKVEISKLSCRMCGITMDSLSTLRRHLSDEHAILFASDDDLLVPFKLQNDLKCQICHERFSVFRLLNIHVNKHYRKHVCHVCGAGFTSLVFLNLHRTRAHRPLTCRQCDATFVTRNDKKQHEINVHGLKCERKLRFPCPYCEDRFYQENFRVLHLVEKHGFARPEHRCVVCAKTFVTRSLLNNHTKNVHNKEKNHKCDICQNLFYTKSDLGRHRVTHTGERKHNCGVCNAKFTTKDSLRRHAKRAHPV

Uniprot

H9JGX2   A0A1E1W9A8   A0A212FM41   A0A0N1IBG1   A0A194RAB8   H9JGX4   + More
A0A2W1BKF2   A0A2H1VJH2   A0A2H1VCI6   A0A0N0P9Y2   A0A2H1WWB4   A0A0N1IN25   H9JGZ7   A0A194RE62   A0A3S2NKW4   A0A2A4K7C4   A0A2H1WQT9   A0A0L7KTS4   A0A0L7L9S7   A0A0N0P9X6   A0A2A4JIU7   A0A0N0P9L6   H9JGX0   A0A2H1VN70   A0A0L7LKX9   H9JGW9   A0A2A4J9B0   A0A2H1VCI0   S4PER6   A0A0L7KT95   A0A0L7KFK0   A0A2H1VJJ9   A0A2H1VCN2   H9JGZ8   H9JGV6   H9JGY8   A0A0L7KMW9   A0A194R9B4   H9JGY7   A0A212FGL8   A0A0N0PDP7   A0A3S2PBY9   A0A0N1IN28   A0A2A4K6K7   H9JGW0   A0A2A4J945   A0A2H1VCI8   H9JGW8   H9JGW1   H9JGW6   A0A194Q9X6   A0A0N1PEC3   A0A194Q9V0   A0A0L7KT37   H9JGV3   A0A0N0PET6   A0A3S2LYM8   A0A2H1VP71   A0A0N1IBB3   A0A0L7L357   A0A212ESM8   A0A2H1WCN7   A0A2H1W1N2   A0A0L7L463   A0A194RAC3   A0A2A4J8X5   A0A2H1W7P8   A0A2H1WUW5   A0A2H1VCK4   I4DPX2   H9JGY5   A0A2H1WDA4   A0A3S2NBW7   A0A0N1PHE9   A0A0L7KV10   A0A3S2NRY5   A0A212ESL7   A0A2A4J4B8   A0A0L7KVB5   A0A0N0P9L3   A0A2A4K655   A0A194R9N0   A0A212FGI7   A0A0N1PGX7   A0A2W1B758   A0A0L7LA79   A0A3S2NGJ4   A0A1E1W7Z3   A0A194R8Q8   A0A0L7LM85   A0A2H1W9H2   A0A3S2LZS5   H9JGV8   A0A0N1PFT1   A0A2A4K5P5   A0A2W1CJD2   A0A0N1IFX5  

Pubmed

19121390    22118469    26354079    28756777    26227816    23622113    + More
22651552   

EMBL

BABH01037767    GDQN01007498    JAT83556.1    AGBW02007657    OWR54801.1    KQ459348    + More
KPJ01327.1    KQ460500    KPJ14220.1    KZ150113    PZC73316.1    ODYU01002903    SOQ40977.1    ODYU01001825    SOQ38559.1    KPJ01330.1    ODYU01011553    SOQ57363.1    KPJ01311.1    BABH01037823    KPJ14216.1    RSAL01000335    RVE42465.1    NWSH01000101    PCG79550.1    ODYU01010371    SOQ55440.1    JTDY01005941    KOB66449.1    JTDY01002088    KOB72139.1    KPJ01310.1    NWSH01001274    PCG71891.1    KPJ01329.1    BABH01037776    ODYU01003449    SOQ42246.1    JTDY01000693    KOB76193.1    NWSH01002560    PCG67983.1    SOQ38558.1    GAIX01004367    JAA88193.1    JTDY01006056    KOB66330.1    JTDY01009952    KOB62102.1    SOQ40976.1    SOQ38561.1    BABH01037836    BABH01037794    BABH01037801    BABH01037802    JTDY01008298    KOB64638.1    KPJ14222.1    AGBW02008655    OWR52853.1    KQ460130    KPJ17537.1    RSAL01000113    RVE47005.1    KPJ01325.1    PCG79548.1    BABH01037789    PCG67980.1    SOQ38560.1    BABH01037779    BABH01037786    BABH01037787    BABH01037788    BABH01037780    KQ459249    KPJ02297.1    KPJ01331.1    KPJ02298.1    KOB66448.1    BABH01037797    BABH01037798    BABH01037799    BABH01037800    KQ459805    KPJ19892.1    RVE47008.1    SOQ42242.1    KPJ17535.1    JTDY01003343    KOB69699.1    AGBW02012775    OWR44479.1    ODYU01007784    SOQ50841.1    ODYU01005781    SOQ47000.1    JTDY01003077    KOB70190.1    KPJ14225.1    PCG67984.1    ODYU01006883    SOQ49125.1    ODYU01011236    SOQ56850.1    SOQ38557.1    AK403822    BAM19962.1    BABH01037793    SOQ50842.1    RVE47007.1    KPJ17536.1    JTDY01005531    KOB66911.1    RVE47009.1    OWR44477.1    NWSH01003163    PCG66841.1    JTDY01005417    KOB67026.1    KPJ01319.1    PCG79549.1    KPJ14214.1    OWR52852.1    KPJ01324.1    KZ150324    PZC71398.1    KOB72141.1    RVE47011.1    GDQN01007938    JAT83116.1    KPJ14223.1    JTDY01000653    KOB76326.1    SOQ49124.1    RSAL01000095    RVE47828.1    BABH01037792    KPJ01318.1    PCG79551.1    NHMN01023780    PZC87382.1    KPJ17539.1   

Proteomes

UP000005204    UP000007151    UP000053268    UP000053240    UP000283053    UP000218220    + More
UP000037510   

PRIDE

H9JGX2    H9JGX4    H9JGZ7    H9JGX0    H9JGW9    H9JGZ8    + More
H9JGV6    H9JGY8    H9JGY7    H9JGW0    H9JGW8    H9JGW1    H9JGW6    H9JGV3    H9JGY5    H9JGV8   

Pfam

PF07776   zf-AD        + More
PF00096   zf-C2H2
PF12756   zf-C2H2_2
PF05225   HTH_psq

Interpro

IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf       
IPR012934   Znf_AD       
IPR041661   ZN622/Rei1/Reh1_Znf-C2H2       
IPR003656   Znf_BED       
IPR011031   Multihaem_cyt       
IPR003604   Matrin/U1-like-C_Znf_C2H2       
IPR007889   HTH_Psq       
IPR009057   Homeobox-like_sf       

SUPFAM

SSF57667   SSF57667        + More
SSF46689   SSF46689       

ProteinModelPortal

H9JGX2   A0A1E1W9A8   A0A212FM41   A0A0N1IBG1   A0A194RAB8   H9JGX4   + More
A0A2W1BKF2   A0A2H1VJH2   A0A2H1VCI6   A0A0N0P9Y2   A0A2H1WWB4   A0A0N1IN25   H9JGZ7   A0A194RE62   A0A3S2NKW4   A0A2A4K7C4   A0A2H1WQT9   A0A0L7KTS4   A0A0L7L9S7   A0A0N0P9X6   A0A2A4JIU7   A0A0N0P9L6   H9JGX0   A0A2H1VN70   A0A0L7LKX9   H9JGW9   A0A2A4J9B0   A0A2H1VCI0   S4PER6   A0A0L7KT95   A0A0L7KFK0   A0A2H1VJJ9   A0A2H1VCN2   H9JGZ8   H9JGV6   H9JGY8   A0A0L7KMW9   A0A194R9B4   H9JGY7   A0A212FGL8   A0A0N0PDP7   A0A3S2PBY9   A0A0N1IN28   A0A2A4K6K7   H9JGW0   A0A2A4J945   A0A2H1VCI8   H9JGW8   H9JGW1   H9JGW6   A0A194Q9X6   A0A0N1PEC3   A0A194Q9V0   A0A0L7KT37   H9JGV3   A0A0N0PET6   A0A3S2LYM8   A0A2H1VP71   A0A0N1IBB3   A0A0L7L357   A0A212ESM8   A0A2H1WCN7   A0A2H1W1N2   A0A0L7L463   A0A194RAC3   A0A2A4J8X5   A0A2H1W7P8   A0A2H1WUW5   A0A2H1VCK4   I4DPX2   H9JGY5   A0A2H1WDA4   A0A3S2NBW7   A0A0N1PHE9   A0A0L7KV10   A0A3S2NRY5   A0A212ESL7   A0A2A4J4B8   A0A0L7KVB5   A0A0N0P9L3   A0A2A4K655   A0A194R9N0   A0A212FGI7   A0A0N1PGX7   A0A2W1B758   A0A0L7LA79   A0A3S2NGJ4   A0A1E1W7Z3   A0A194R8Q8   A0A0L7LM85   A0A2H1W9H2   A0A3S2LZS5   H9JGV8   A0A0N1PFT1   A0A2A4K5P5   A0A2W1CJD2   A0A0N1IFX5  

PDB

5WJQ     E-value=3.55083e-12,     Score=173

KEGG

101736402    no KO assigned | (RefSeq) zinc finger protein 596-like

GO

GO:0008270   GO:0003676   GO:0005634   GO:0003677   GO:0016021   GO:0046872   GO:0006101   GO:0003824   GO:0008152   GO:0016491   GO:0015930  

Length:

379

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.21727

Exp number, first 60 AAs:

0

Total prob of N-in:

0.02546

outside

1  -  379

 

 

Pi

261.198529

Theta

150.847249

Tajima's D

2.146907

CLR

0.14793

CSRT

0.904004799760012

Interpretation

Uncertain