Gene

KWMTBOMO14592

Pre Gene Modal

BGIBMGA008756

Annotation

PREDICTED:_zinc_finger_protein_729_[Bombyx_mori]

Location

Bomo_Chr24(+):10934299-10940071      View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 4.717

CDS

ATGAATTCTAATAAAAAAGGACCCATAATTGACTCTGGCTCGTGTCGTTGCTGCGGTGCCACAAAACGTTGTCGTTTGCTAAATGTTGAATACGACTGGAGCGGCCAAAAAGAGATTTATTCAGACATGTTTTTAGATTGTTTTGGACTTCTATTATCACACTTAGATGGTGAGGCAGAGGAACGTCTGATATGCGCAACCTGCGTGCTGAGGCTTCGTGATGCTAGTCTCTTCAGGAGACAAGTACTGCTGTGCGAGGAGACATTATTGAAAAGCAGGATGACCACAGTTACAGAAAACGACATTGAATTGAAGGTTGACATTGAAGTTAAGAAAGAGACAAGCGACCACTGCATTTTGGAGGAATCAAACAATAATGATTGTTTGTATAGTGATAATGACAATGACAATAATACCAGCGATGGACATATGGATTGTGGCAGTAATGAAGACATGAAAATAAAGCACGAATCTACAAATAAAGTAAAGGAGCTTCCAAAACTAGGTCTACGCTCTAAGGAAACAGTCAGAAAACCAGGCAGGAAGAGAATGAGTTTGAAAGATGTGAAAGTGAAAAGGGAAATGCTGATGAACTTAAAATACATGAAACAAAAGTTGTTGATGATGAAGAAGAACAATCTCCAAATAAAACAGCCGATAGTCAAATTAGTAAAAATGAAGCCCTACATAGACAAGGACTACAATTCATTACAGAACGCGATCACTATAGTTAAAAACTCGTTTGTCTGTCCGTTCTTTACTATTTACGGAGACTATCACTGTATGTACTGCAGGGAAATGTTCACCGATCCCTCAGAGCTAAGGGTGCACACCCTGAAACACGACCCGGCCACTTACAAGGACGTTGTTGAATCGAAAAAGAATTTACTAATCGATATCGACAGAATCGATTGTCGTCTATGCCCGACGAACATCGATAATATTGATTCACTGAAGACCCACCTCACTACGGTTCACGGCCAAAAGATTCACAACGAGACGAGCAATGAATTTTTGAAATTCAAATTGAAGTTAGGTCTGTTGTCTTGCACGGAATGCGGTTTGTCTTGTAACTCGTTTCAAGCACTCAAAAGGCATTTGGCGGTGCATTTCGGTTCATTTATATGCGAGGAGTGTGGTACTCATTATTTTGAAGAGCGCTTACTGACCTTCCACAAGAAAAGGGCACATAACACCGATTCTAACAAGCACGAGGACTACGTTTGCGACCGGTGCGGCAAGAACTTCCGCAGCAAGAAGGGCAAGAGCTATCACGTGGCCAAAATTCACGAGAAGGAACCGGTCTTCGCCTGCAACAAATGCGATGAGGTCTTTCTGTCCTACCACTTGAAGTACAAACACAAAATGGAGGAGCACGGCGAGAAGCGTTCGTTTCCTTGTTCGAGTTGCGATAAGATCTACAACAATCGCAAGGCGTTGCGGGAGCACAACCGTAAAAATCACCTACAGCTGCTGAAACATAAATGTCCGCTATGCGACCGCAGGTTCTACGTGCCTTCTGAGCTCAAAGACCACATGACCTCGCACACGGGGGAAAGAAACTACAGATGCGAGTACTGCGGCAAAACCTACCCCAGACTAAAAGCTCTGAAAGTGCACATGGAATCGCATAACACCGAGAAGAAATACAAGTGCGGATTGTGTACCGCCTCGTATACGCAGTTAAACAATTATAAAAATCATGTAAAGAGCAAACATCCCGTCGGTACTAATAGTAGTGCGTATGTATGA

Protein

MNSNKKGPIIDSGSCRCCGATKRCRLLNVEYDWSGQKEIYSDMFLDCFGLLLSHLDGEAEERLICATCVLRLRDASLFRRQVLLCEETLLKSRMTTVTENDIELKVDIEVKKETSDHCILEESNNNDCLYSDNDNDNNTSDGHMDCGSNEDMKIKHESTNKVKELPKLGLRSKETVRKPGRKRMSLKDVKVKREMLMNLKYMKQKLLMMKKNNLQIKQPIVKLVKMKPYIDKDYNSLQNAITIVKNSFVCPFFTIYGDYHCMYCREMFTDPSELRVHTLKHDPATYKDVVESKKNLLIDIDRIDCRLCPTNIDNIDSLKTHLTTVHGQKIHNETSNEFLKFKLKLGLLSCTECGLSCNSFQALKRHLAVHFGSFICEECGTHYFEERLLTFHKKRAHNTDSNKHEDYVCDRCGKNFRSKKGKSYHVAKIHEKEPVFACNKCDEVFLSYHLKYKHKMEEHGEKRSFPCSSCDKIYNNRKALREHNRKNHLQLLKHKCPLCDRRFYVPSELKDHMTSHTGERNYRCEYCGKTYPRLKALKVHMESHNTEKKYKCGLCTASYTQLNNYKNHVKSKHPVGTNSSAYV

Uniprot

H9JGV9   A0A2A4J945   A0A212FGJ0   H9JGV8   A0A194RAC3   A0A2H1W7P8   + More
A0A212FGI7   H9JGY5   A0A0N1IBB3   A0A0N1PGX7   H9JGW1   A0A0N1IN28   A0A2A4JIU7   A0A212FGL8   S4NL96   A0A0N0PDP7   A0A3S2NBW7   H9JGU3   A0A3S2PBY9   A0A2H1VCI6   A0A2A4K6K7   A0A2A4K655   A0A3S2NKW4   A0A1E1WEJ1   A0A194R8P8   A0A2A4K5P2   A0A0N0P9L4   A0A0N0PET9   A0A194R9B9   A0A3S2LYM8   A0A0N1I342  

Pubmed

19121390    22118469    26354079    23622113   

EMBL

BABH01037791    BABH01037792    NWSH01002560    PCG67980.1    AGBW02008655    OWR52854.1    + More
BABH01037793    KQ460500    KPJ14225.1    ODYU01006883    SOQ49125.1    OWR52852.1    BABH01037794    KQ460130    KPJ17535.1    KQ459348    KPJ01324.1    BABH01037786    BABH01037787    BABH01037788    KPJ01325.1    NWSH01001274    PCG71891.1    OWR52853.1    GAIX01014736    JAA77824.1    KPJ17537.1    RSAL01000113    RVE47007.1    BABH01037827    BABH01037828    BABH01037829    RVE47005.1    ODYU01001825    SOQ38559.1    NWSH01000101    PCG79548.1    PCG79549.1    RSAL01000335    RVE42465.1    GDQN01005632    JAT85422.1    KPJ14213.1    PCG79547.1    KPJ01322.1    KQ459805    KPJ19902.1    KPJ14227.1    RVE47008.1    KPJ01321.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053240    UP000053268    UP000283053    + More

PRIDE

H9JGV9    H9JGV8    H9JGY5    H9JGW1    H9JGU3   

Pfam

PF00096   zf-C2H2        + More
PF07776   zf-AD
PF12756   zf-C2H2_2
PF01391   Collagen

Interpro

IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf       
IPR012934   Znf_AD       
IPR003656   Znf_BED       
IPR041661   ZN622/Rei1/Reh1_Znf-C2H2       
IPR008160   Collagen       

SUPFAM

SSF57667   SSF57667       

ProteinModelPortal

H9JGV9   A0A2A4J945   A0A212FGJ0   H9JGV8   A0A194RAC3   A0A2H1W7P8   + More
A0A212FGI7   H9JGY5   A0A0N1IBB3   A0A0N1PGX7   H9JGW1   A0A0N1IN28   A0A2A4JIU7   A0A212FGL8   S4NL96   A0A0N0PDP7   A0A3S2NBW7   H9JGU3   A0A3S2PBY9   A0A2H1VCI6   A0A2A4K6K7   A0A2A4K655   A0A3S2NKW4   A0A1E1WEJ1   A0A194R8P8   A0A2A4K5P2   A0A0N0P9L4   A0A0N0PET9   A0A194R9B9   A0A3S2LYM8   A0A0N1I342  

PDB

5V3M     E-value=1.11311e-18,     Score=231

KEGG

101745083    K09228 KRAB domain-containing zinc finger protein | (RefSeq) zinc finger protein 729

GO

GO:0003676   GO:0005634   GO:0008270   GO:0003677   GO:0046872   GO:0006101   GO:0003824   GO:0008152   GO:0016491   GO:0015930  

Length:

583

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0900199999999999

Exp number, first 60 AAs:

0.00015

Total prob of N-in:

0.00519

outside

1  -  583

 

 

Pi

236.592738

Theta

171.955598

Tajima's D

0.632607

CLR

0.215462

CSRT

0.55997200139993

Interpretation

Uncertain