Gene

KWMTBOMO14581

Pre Gene Modal

BGIBMGA008786

Annotation

PREDICTED:_zinc_finger_protein_26-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr24(-):10795930-10803098      View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 4.529

CDS

ATGCAGCCATGCCGCCACTTCCGAGGAGACGAAGACGACGGTGATGAGGCCTTTGGTTGCGAGTCAGCCTGCTCGCAGAAGACCAGGCCAAATGTCTGTAGGTGTTGTCTATCTGCTGGCGGCGAGTGGGATATTACGACGTCTTATTTAAGTGCGGACGGAAAAAAAGAAGTTTATTCTGAAATACTAAAGGATTGTTTCGGGATTTCTCTATCGATCATAAAAAATATAAGTCTGAGTTTGCGAGTTTGTCAACTATGCGTGGAACACCTCCGTGAGGCGAGTTCGTTCAAGAAACAAGTTCTAAATGCTGAAAAAGTTTTCAAGCAATATTACGATATTCATCGAGATGTAGCAAAACCTTTAGGAAATACCTTAAAAGAGGATGACAATTTAATATGCGGCGTGAACTCTATTGAAGGCAGCGATTTGCAAAGAAAACCCGATTCACTTAATATTTGCAAGAGAGGCAGGGAAAGAGAATCGAATGGGCACATAGTTGATGATGATGTTGATGATGATGATGATGATGAAGAGACACCCATATCGGAACTCGTGAAGAGGAATTCGCATTTCAAAATACAAGATGAGACTTCAAAACATATTGACCCTAAAGTTGAGAGGCGTAGAGTCCAAAACTTATGTCAATATAAAGTACAGAATTCCGTTAAGGAGCTATCGGAACGGAAACGACTCATCGTAACTTGCGAGACGGTCCTCAAGTGGACCACCGCTTGTCCCTTCCGCCACCACAAAAGCTGGTTCCAGTGCTTCTACTGCACCGATGACTTCATGGAGATCGCGAAGCTTCGCGAGCACACGGCCAAAGCCCACAATAACACAGACGACGAATTAAAAAAAATTAAACGCTTCCCTAGATCATTGCAGATCGACATATCGAATCTCAAATGTTGCCAGTGCGAATTAAATTTAGTTGACGTCGAAGCGATGCGGCGTCATCTCGCCGAAGCCCACAACCGGGTTCTGTACAAAGAATGCATAGCCGATTACAAAGTGAACACCAGTCCTTACACTTGCCACTTGTGCGGGAAACGGTACCACGTGTTCCGTAGTCTGACCACGCATCTGAATGTGCACTACGCGAATTGCGTTTGTGATGTGTGCGGGAAATCTTTTATGAACACGAAACGGCTTAAGGTCCACAGGGCGACCCACGAGAATGGCCACTATCCCTGTTCCGAATGTGGGAAGGTTTTGAAAACGAAAATATCGAAAGCGAACCACATGGGTACGCACGCGAAGCGCGTCCTAAAATGCCACATCTGCTTCGAACCGATGAAGCACTACAACGATCGTCTGAAGCACATGTCCGAGCGGCATAATGTGACGCACAAGTTTGTGTGCCCGGTGTGCGGGAGGGAGTTCAATCTCAAGCATTATCTGGCGACGCACGTGCGGCAGACTCACGGGAATAGAAACAAGGCGTGCCCGGATTGCGGGATGACGTTCAAGACGAATTACGGGCTTAAGAAGCACATGCTGAGGCACTCTGGGATCAGGGCCTTCAAGTGCTCGGTGTGCTGTAAGACGTACGCCAGGAGTTATACGTTGAGGGAGCACTTAAGGACCCACGAGAGCGAGGGGGTGGCGACCCTAACATGA

Protein

MQPCRHFRGDEDDGDEAFGCESACSQKTRPNVCRCCLSAGGEWDITTSYLSADGKKEVYSEILKDCFGISLSIIKNISLSLRVCQLCVEHLREASSFKKQVLNAEKVFKQYYDIHRDVAKPLGNTLKEDDNLICGVNSIEGSDLQRKPDSLNICKRGRERESNGHIVDDDVDDDDDDEETPISELVKRNSHFKIQDETSKHIDPKVERRRVQNLCQYKVQNSVKELSERKRLIVTCETVLKWTTACPFRHHKSWFQCFYCTDDFMEIAKLREHTAKAHNNTDDELKKIKRFPRSLQIDISNLKCCQCELNLVDVEAMRRHLAEAHNRVLYKECIADYKVNTSPYTCHLCGKRYHVFRSLTTHLNVHYANCVCDVCGKSFMNTKRLKVHRATHENGHYPCSECGKVLKTKISKANHMGTHAKRVLKCHICFEPMKHYNDRLKHMSERHNVTHKFVCPVCGREFNLKHYLATHVRQTHGNRNKACPDCGMTFKTNYGLKKHMLRHSGIRAFKCSVCCKTYARSYTLREHLRTHESEGVATLT

Uniprot

H9JGY9   A0A2H1W1Q8   A0A0N1IFX5   A0A2A4JCT4   A0A1E1WEJ1   A0A0N0P9L1   + More
H9JGU3   A0A2A4K655   A0A194R9B4   A0A3S2NKW4   A0A0N0P9X6   A0A0N1IN28   A0A2H1W1N2   H9JGW1   A0A0N0P9L4   A0A2A4JIU7   A0A212FGL8   A0A2H1W2Z8   A0A0N0PET9   A0A2H1W4Q3   A0A212FGI7   H9JGV8   A0A2W1BKF2   A0A194R9B9   A0A194RAC3   A0A3S2PBY9   A0A2A4J945   A0A212FGJ0   A0A0N1PHE9   A0A2H1W7P8   A0A0N1I342   A0A2A4K5P2   A0A3S2LYM8   A0A2H1VCI6   A0A2H1VP71   H9JGZ0   H9JGX2   H9JGY5   A0A194QA48  

Pubmed

19121390    26354079    22118469    28756777   

EMBL

BABH01037802    BABH01037803    ODYU01005781    SOQ46998.1    KQ460130    KPJ17539.1    + More
NWSH01001894    PCG69771.1    GDQN01005632    JAT85422.1    KQ459348    KPJ01309.1    BABH01037827    BABH01037828    BABH01037829    NWSH01000101    PCG79549.1    KQ460500    KPJ14222.1    RSAL01000335    RVE42465.1    KPJ01310.1    KPJ01325.1    SOQ47000.1    BABH01037786    BABH01037787    BABH01037788    KPJ01322.1    NWSH01001274    PCG71891.1    AGBW02008655    OWR52853.1    ODYU01006008    SOQ47480.1    KQ459805    KPJ19902.1    ODYU01006258    SOQ47936.1    OWR52852.1    BABH01037792    BABH01037793    KZ150113    PZC73316.1    KPJ14227.1    KPJ14225.1    RSAL01000113    RVE47005.1    NWSH01002560    PCG67980.1    OWR52854.1    KPJ17536.1    ODYU01006883    SOQ49125.1    KPJ01321.1    PCG79547.1    RVE47008.1    ODYU01001825    SOQ38559.1    ODYU01003449    SOQ42242.1    BABH01037767    BABH01037794    KQ459249    KPJ02299.1   

Proteomes

UP000005204    UP000053240    UP000218220    UP000053268    UP000283053    UP000007151    + More

PRIDE

H9JGY9    H9JGU3    H9JGW1    H9JGV8    H9JGZ0    H9JGX2    + More
H9JGY5   

Pfam

PF00096   zf-C2H2        + More
PF07776   zf-AD
PF12756   zf-C2H2_2
PF01391   Collagen
PF05225   HTH_psq

Interpro

IPR036236   Znf_C2H2_sf        + More
IPR013087   Znf_C2H2_type       
IPR012934   Znf_AD       
IPR041661   ZN622/Rei1/Reh1_Znf-C2H2       
IPR008160   Collagen       
IPR007889   HTH_Psq       
IPR009057   Homeobox-like_sf       
IPR003656   Znf_BED       

SUPFAM

SSF57667   SSF57667        + More
SSF46689   SSF46689       

ProteinModelPortal

H9JGY9   A0A2H1W1Q8   A0A0N1IFX5   A0A2A4JCT4   A0A1E1WEJ1   A0A0N0P9L1   + More
H9JGU3   A0A2A4K655   A0A194R9B4   A0A3S2NKW4   A0A0N0P9X6   A0A0N1IN28   A0A2H1W1N2   H9JGW1   A0A0N0P9L4   A0A2A4JIU7   A0A212FGL8   A0A2H1W2Z8   A0A0N0PET9   A0A2H1W4Q3   A0A212FGI7   H9JGV8   A0A2W1BKF2   A0A194R9B9   A0A194RAC3   A0A3S2PBY9   A0A2A4J945   A0A212FGJ0   A0A0N1PHE9   A0A2H1W7P8   A0A0N1I342   A0A2A4K5P2   A0A3S2LYM8   A0A2H1VCI6   A0A2H1VP71   H9JGZ0   H9JGX2   H9JGY5   A0A194QA48  

PDB

2I13     E-value=2.02518e-15,     Score=202

KEGG

101746105    K22534 PR domain zinc finger protein 5 | (RefSeq) zinc finger protein 26-like

GO

GO:0003676   GO:0008270   GO:0005634   GO:0016021   GO:0003677   GO:0046872   GO:0006101   GO:0003824   GO:0008152   GO:0016491   GO:0015930  

Length:

540

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00196

Exp number, first 60 AAs:

0.00018

Total prob of N-in:

0.00213

outside

1  -  540

 

 

Pi

320.341683

Theta

203.91761

Tajima's D

1.736423

CLR

0

CSRT

0.838458077096145

Interpretation

Uncertain