SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14448
Pre Gene Modal
BGIBMGA000085
Annotation
PREDICTED:_zinc_finger_protein_91-like_[Amyelois_transitella]
Location
Bomo_Chr24(-):6587549-6594747      View in EpiBrowser
Transcription factor
zf-C2H2
Location in the cell
Nuclear   Reliability : 4.637
 

Sequence

CDS
ATGACTTCAGAAGAACACTTTCCAGTCAAAATGAAAGACGCGATCAGCATAAATCTAGAAAATGAAGAATTACATTTAAAAACGAAACTGGAAGTCAATAATTATGCTACTAGTGAAGGTCAAACTTCAGTAGCATTTCAACAAAATAATGTTCAAGATATACGCACCCAATGTAATGAACAATCTGTCCAAAACAATCACCCTCAGGTAGACTGTAATGAGACAAACGATCATGGAAGAATTAATAATATTGCCGATAATCAGACTTCGATCGAAATTAAAGAGAGCTCAAATATAGAAGAAGAAAATATAGAAGATCAATCAATAAACCTTAGTAATTATGATAATCACGAGACAAAAACACAAATAACAGATGTACTAGGTGCGAACCAAGATGAAAATGCATCTCAAAACAAAGATTTAGGTAAAATCAATATAAAATCGTATATAGAATTAGAAGGAAACACGATTGGTTTACTAAAACAAGAAGAAATACCGGCGTGTGTGATTGAAGCGTGCGAGGAATTAAAAATGAACGAAATATCAACTGACGATACTGAGAGCAATGATGTAGATGACGAAATAGTCACTGACGGTCCAGAAACGGATCAAATCGTTAATCGAACGACAGAAGACGTTACACCAATAAACACCTACACGCGGCACGAAGAGCTAAACCAAAAACTCAGCATCAAAGTCGAAGGCGGTCAAAGTGAGATGAGCGTGAACGCTGGCACTAGAGCTGATGAAGCTGATCTGCGTGAAGCCAACGTCGACAATGTCAGTAATGCCGACGCCACAGACGCCGGAATAAATGTGAAGACAGAACATTTCACATACGGCGATTTCAATAAGGACTGCCCAAAGAGCCAACTAGTTATAAAACAAGAATATGACGATATATATTCCGAGGGTGTTTCTCAAAGCAGTGATTGCTCTATAAAGATTTTGTCGGTTGGTACTTTGAAAGATGAACTAAAGCGCCAAGAGTGCGGGATTCCAGATTACAGTGACGCAGTCAAACTGGAGGCTACCGGAGATGACTTCACTTCGTTCGATTATCCTAATTACGATGACAGCATGGACAGCAATGAGGCTGCAGCTTTTTGTAGAGTCGAAACTTGTCTCCAAGAAGACGGACAAAGGATCGAACGTAATCAGATTTATGATGATAAACAAGACTTGTATAGAGTAATCAAGGAGGAGGAACACTTGACGGTGACCGACACACATATAATTTCCAACAAGCTCACCAACACGTCATTGTACGCAAACCCCTATGATGTGCTGATAAAAAGTAAAAAAGGATTAGTCATGGAAATACGACCTATGTCCGGGCGAAATTTCGGTATGAAATCCGGCAACCCAGAAGAGATATTGCCAACAATCGACAATTACGACGATTACGAAGCTTTCCAATTGAATTCGATCACCGGAGACGTTGCGTCTCTCGAGCAAGAAGCCTACGGTCTCCTGAAAGCTAAAACGAAGACGACACGCAGAAAAAAGCACGTTTGTCCGAAGTGCGGTAATGCATACGCATCAGAAACATGCCTGAAGAGGCACCTCAAAGTCCACGACACTATTGAGAAGCAAACGAAAACTTCGGTGAAGAGACAAAAGGCTAAAATCGATAATCAGAGTAAAAAAGTCGATTCACTGAAATCGAGCATCGGCAAGAAGAAGAAAAACGCTGTCATTGAAACTAAAGTGGAAAAAATCGACATAGAACCAATCGCGGAGAAGAAGACGGACAAAGAAGGCTACGTGTGCATCTGCGGCGACGTTTTCCGGCGCAGGATTCGTATGGAGACCTGCATGAGGTCGCACAACACGGACCCCGACGTGAGTCACGTCAAGTGCACGACTTGCTCGAAGAACTTCAACAGCAAAGAGGAGTTGGCCTTCCACAGGAAACGAGTCCACAGGAAGCGGTTTCCTTGCAAGTTCTGCCCCACGGACTACGACACCGGGAAAGACCTATTCGAACACCTGAAAATCCACCGGCAAGTTCAACTGACCGAGTTCAAGGTTATATCGGAGATGGTCAACGGTAAGGAGATATTAAAGTGTTTTATGTGCAATAACTCTTTTAAGGAGCTACCTCAGCTGAAGTGTCACGTGATGGAAGATCACGTAGAGCCCTACTCGTGTAGGTACTGCAGAGCGGCGATCCCTAATATTATCGACTTCGCGAAACACATTAAATCGTTTCATCCCGAAGTTGAAGGTCAGTCACTCCTGGACGTTCTCGAGGCCTTCTCCAAATTGGTGCAAGCTTGGAAATGTGAGGAATGCGGCATGCAGTTCCACGAAGCAGATAAACTGGCTCTGCATCAGGCGGAGACTCACAACCCAGACTTAAGAGAGCAACTTCAGATACAATGTGAAGATTGCCGGAGAGTGTTTGTCAGTCACAAGGGCCTACAGTCTCACAGGAGAGTGCATCACAGCGTCGAAGTCGAGTCCGCGCCGCCTGAGGAGGCCGGGGTCATGTGTGTGGAGTGCCGCAAGATGTGCAAGGACATGGAGGCGCTGACGTCCCACATGAGGCTGCATTCGCCCGAGAGGAAATTTCCCTGCAAGTTCTGTGATTTCCGCTTCGCCACCGCGGAAAAGAGGAGAGTCCACCAGGAGCTACACACTGGCGACATGAAGTACGTCTGCTTTATATGCGAGTACCAGTGCACGTCGGAGAACCGGTTGAAACTGCACAAACGATCAGCCAAACACCAGAGCATGAAGGAGTACCTGCTGTCTGGGGCCTCGCTGACCGAGGAGAAGCCCGCAGCGAGCGAAGAAAGGAAAAACAAGAAAGAGACAAGATTCAAAAAGAGGAAGAAAGAAAGAGATAGAAGCGCGGGCAGTGGGTCCTCCGGGAGCTCCGTGCTGTGCGATGTGTGTGGTGACAAGTTTCCCAGCAAGAGCCTGATGCTGGAACACAAACAGTCGCATCCCTTCATAGAGTTCCCCAACGAAGACAAACCCACTAGGATATTCTTCAAATATCATTAA
Protein
MTSEEHFPVKMKDAISINLENEELHLKTKLEVNNYATSEGQTSVAFQQNNVQDIRTQCNEQSVQNNHPQVDCNETNDHGRINNIADNQTSIEIKESSNIEEENIEDQSINLSNYDNHETKTQITDVLGANQDENASQNKDLGKINIKSYIELEGNTIGLLKQEEIPACVIEACEELKMNEISTDDTESNDVDDEIVTDGPETDQIVNRTTEDVTPINTYTRHEELNQKLSIKVEGGQSEMSVNAGTRADEADLREANVDNVSNADATDAGINVKTEHFTYGDFNKDCPKSQLVIKQEYDDIYSEGVSQSSDCSIKILSVGTLKDELKRQECGIPDYSDAVKLEATGDDFTSFDYPNYDDSMDSNEAAAFCRVETCLQEDGQRIERNQIYDDKQDLYRVIKEEEHLTVTDTHIISNKLTNTSLYANPYDVLIKSKKGLVMEIRPMSGRNFGMKSGNPEEILPTIDNYDDYEAFQLNSITGDVASLEQEAYGLLKAKTKTTRRKKHVCPKCGNAYASETCLKRHLKVHDTIEKQTKTSVKRQKAKIDNQSKKVDSLKSSIGKKKKNAVIETKVEKIDIEPIAEKKTDKEGYVCICGDVFRRRIRMETCMRSHNTDPDVSHVKCTTCSKNFNSKEELAFHRKRVHRKRFPCKFCPTDYDTGKDLFEHLKIHRQVQLTEFKVISEMVNGKEILKCFMCNNSFKELPQLKCHVMEDHVEPYSCRYCRAAIPNIIDFAKHIKSFHPEVEGQSLLDVLEAFSKLVQAWKCEECGMQFHEADKLALHQAETHNPDLREQLQIQCEDCRRVFVSHKGLQSHRRVHHSVEVESAPPEEAGVMCVECRKMCKDMEALTSHMRLHSPERKFPCKFCDFRFATAEKRRVHQELHTGDMKYVCFICEYQCTSENRLKLHKRSAKHQSMKEYLLSGASLTEEKPAASEERKNKKETRFKKRKKERDRSAGSGSSGSSVLCDVCGDKFPSKSLMLEHKQSHPFIEFPNEDKPTRIFFKYH

Summary

Uniprot
H9IS59  
Pubmed
19121390   
EMBL
BABH01024200    BABH01024201    BABH01024202   
Proteomes
UP000005204   
PRIDE
H9IS59   
Pfam
PF00096   zf-C2H2
Interpro
IPR036236   Znf_C2H2_sf        + More
IPR013087   Znf_C2H2_type       
SUPFAM
SSF57667   SSF57667       
ProteinModelPortal
H9IS59  
PDB
5WJQ     E-value=2.45569e-14,     Score=196

Ontologies

KEGG
101740312    no KO assigned | (RefSeq) uncharacterized LOC101740312
GO
GO:0003676   GO:0046872   GO:0030246   GO:0004553   GO:0004812   GO:0006418   GO:0005507   GO:0004713   GO:0016491   GO:0015930  

Topology

Length:
1004
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00000
outside
1  -  1004
 
 

Population Genetic Test Statistics

Pi
25.000097
Theta
204.638557
Tajima's D
0.8789
CLR
0.223223
CSRT
0.623818809059547
Interpretation
Uncertain
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