SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14274
Annotation
PREDICTED:_zinc_finger_protein_431-like_[Bombyx_mori]
Transcription factor
Location in the cell
Nuclear   Reliability : 2.97
 

Sequence

CDS
ATGTGGAAAAATTTCCTGAATAAGCTTGATTTCAGCTTGAATCTGTCTGAGACAACTAGAGCAAATGCACAAACAATATACATCATTATGGGAAAAAACAATACCATACTTAAAAGCAGAAAGAAGCAAGTGACAAACAAGAAAGAAGCATTGACTACAATTAAAGACAATATCAAAAGCAGACAGAAATATGTCAAGGTCAAAAACAAAAATGTCACCTGTGATGATTGCGGGGAGAGGTTCAAAGCAAAATGGATGTTAAAGCGACACATGAAGAACCGTTGTAGCACAAAATGTTCATGTCCTCAATGTCCCAAAGATTTTTCTACATATTCCTTATTAAAAGGACACATTGAAAGAATGCATCATCCAAAACGAATTAAATGCAAAAAATGCCCAAAAATGTTCAGCACTGAGAAATTACTACATAGACATGACAAAATGTACCACTTAGCAGCCATATGCAAACTGTGTTTTGTGCAATTCCCCTCTGGCAAAGATTTAAAAGTCCACTTAGACAAGCATGAAGTGTACAAATGTCCTCGTTGTGATAAATCACTATTGAATAAAAACACTTTGAAGTTTCATCTAAAAATATGTGGTAATGATGACTCAAAGAAATTAAGCTTTTTTTGTGACATATGTAAAAAAGGCTATGCACGTAAAAATGGTTTGCGAACACATTTGAAGACAGAACATGGGTTTGGTAACTCATTATCATGCAAATGGTGCAGTAAAAAGTTTGATGCTGTCAGTAGACTTAGGAATCACACTGTTAAACACACCAAAGAAAGAAATTATCACTGCGAGCATTGTGGGAACAGATTTGTGACACAAGCAGCTTTGGTTTATCATACCAGACTTCATACTGGTGAGAAACCATTTCCATGTGACATGTGCGAAGAAAGCTTTCTTTCAGCCTCTAGAAGAATGGAACATAAGAGAAGAAAACATTTAGGCCCTTCAAAAGAATGTCCCGTTTGCCACACAAAATTCATAACTACATACTGTTTGAAAAAGCACCTGGAAAGACATTATAATCCACAAAGTAAACTTTATATACTAGAGCCTGATATAAATATTGATCATCTTAGTGTGAATGATGTAAAACAATCTATGTATTTATTACAAACCTTTATATGA
Protein
MWKNFLNKLDFSLNLSETTRANAQTIYIIMGKNNTILKSRKKQVTNKKEALTTIKDNIKSRQKYVKVKNKNVTCDDCGERFKAKWMLKRHMKNRCSTKCSCPQCPKDFSTYSLLKGHIERMHHPKRIKCKKCPKMFSTEKLLHRHDKMYHLAAICKLCFVQFPSGKDLKVHLDKHEVYKCPRCDKSLLNKNTLKFHLKICGNDDSKKLSFFCDICKKGYARKNGLRTHLKTEHGFGNSLSCKWCSKKFDAVSRLRNHTVKHTKERNYHCEHCGNRFVTQAALVYHTRLHTGEKPFPCDMCEESFLSASRRMEHKRRKHLGPSKECPVCHTKFITTYCLKKHLERHYNPQSKLYILEPDINIDHLSVNDVKQSMYLLQTFI

Summary

EMBL
ODYU01012014    SOQ58086.1    NWSH01004191    PCG65371.1    KQ460423    KPJ14825.1    + More
KQ459386    KPJ01231.1    AGBW02013627    OWR43090.1    ODYU01004306    SOQ44029.1    KQ458859    KPJ04846.1    GDQN01008891    JAT82163.1    KQ460124    KPJ17614.1    GAIX01003431    JAA89129.1    KPJ14824.1    KZ150322    PZC71409.1    PCG65372.1    OWR43089.1    KPJ01232.1    AGBW02013061    OWR44034.1    SOQ58085.1    KQ458863    KPJ04728.1    KQ459988    KPJ18801.1    JTDY01000510    KOB76846.1    AGBW02014393    OWR41762.1    NWSH01000005    PCG80992.1    GDQN01001240    JAT89814.1    BABH01031739    ODYU01002539    SOQ40164.1    ODYU01007672    SOQ50664.1    KPJ04729.1    GCES01144910    JAQ41412.1    NHOQ01001935    PWA20668.1    AYCK01005444    KQ459602    KPI93187.1    GCES01019949    JAR66374.1    GCES01139595    JAQ46727.1    KPJ18802.1    HAEB01000267    HAEC01015578    SBQ83799.1    GCES01147830    JAQ38492.1    GCES01000045    JAR86278.1    BABH01021013    GCES01046262    JAR40061.1    HADW01012999    HADX01014946    SBP14399.1    ODYU01002490    SOQ40036.1    RSAL01000051    RVE50218.1    KQ424672    KOF70613.1    GG666492    EEN63297.1    CR450780    HAEH01014707    HAEI01015056    SBS00804.1    GCES01108672    JAQ77650.1    HAEF01003470    HAEG01000521    SBR40852.1    CP026243    AWO96324.1    HAED01014845    HAEE01005457    SBR01290.1    HADZ01006944    HAEA01013374    SBQ41854.1    HADY01001002    HAEJ01018466    SBP39487.1    RJVU01051426    ROL41889.1    GANP01008742    JAB75726.1    KQ423338    KOF73084.1    GGFM01004520    MBW25271.1    NWSH01000035    PCG80442.1    GG666831    EEN41572.1    PCG80440.1    GCES01144909    JAQ41413.1    GGFJ01004507    MBW53648.1    KQ416444    KOF96957.1    GEFM01006352    JAP69444.1    GCES01107064    JAQ79258.1    GGFK01006237    MBW39558.1    AAAB01008807    EAA04381.4    BX088603    ATLV01024557    KE525352    KFB51624.1    GGFK01006238    MBW39559.1   
Pfam
PF00096   zf-C2H2        + More
PF07776   zf-AD
PF12171   zf-C2H2_jaz
PF16622   zf-C2H2_11
PF17917   RT_RNaseH
PF13843   DDE_Tnp_1_7
Interpro
IPR012934   Znf_AD        + More
IPR036236   Znf_C2H2_sf       
IPR013087   Znf_C2H2_type       
IPR036249   Thioredoxin-like_sf       
IPR011017   TRASH_dom       
IPR022755   Znf_C2H2_jaz       
IPR017114   YY-1-like       
IPR041697   Znf-C2H2_11       
IPR041373   RT_RNaseH       
IPR003656   Znf_BED       
IPR017125   Znf_PRDM5-like       
IPR029526   PGBD       
IPR003604   Matrin/U1-like-C_Znf_C2H2       
SUPFAM
SSF57667   SSF57667        + More
SSF52833   SSF52833       
PDB
5V3M     E-value=8.19028e-20,     Score=239

Ontologies

Topology

Length:
380
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00973
Exp number, first 60 AAs:
0.00617
Total prob of N-in:
0.01113
outside
1  -  380
 
 

Population Genetic Test Statistics

Pi
260.523221
Theta
192.87511
Tajima's D
1.185713
CLR
0.000091
CSRT
0.711914404279786
Interpretation
Uncertain
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