Silkworm Genome Informatics Database

Gene

KWMTBOMO14232

Pre Gene Modal

BGIBMGA011111

Annotation

PREDICTED:_zinc_finger_protein_OZF-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr23(-):21110924-21115541 View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear Reliability : 4.631

CDS

ATGTCTAGTAGTTGGAACGGGTTTGGCCTTTGTCGTTGTTGTCATTCGAAAGGTAATTTCAAAACCCTCACTGCACCGCACACATATGAAGGGAAAACTGAAATGTATTCAGAGATATTGCTCAATACTTTTGAATTAAACGTGACTAAAAATTCCGACAGCCTAGATGCATATTGCATTTGTAGAAGATGCGAAACTAGACTCTTAGATGCTGCACAGTTCAAAAGACAAGTGCAGGAGTGTGAGCTTAATTTTTACCGCATTCTGGATTATAAAGATCTCCAAAATTTTGATGAATTGATAAAAAAAGAAAACGAAAGTACAGAATGTGAAGTGTTCAAATCGGAGTGTTTAGCAAATGAAAAAACTCACAATGACCACTCAGACTCCAAATTTGAAGACGATGAAAAACAATTTGATGCAGCCCAAGATCACTCTTCTGATTTTGAAGACACTCCCCTATCGGTGTTGCAGAGCATTAAAACGAACAGACAGACCGACCCCGCTGATTCGGAAGACAAAGAACCTGCTAAAATAGAAGATCTAAAACGAAACTGCGGAAAGGTGAAACCGAAAAAGTATTCGTGCGAGATATGCGAGAAGAGGTTCACGTACAAGGGGTCCCTGGAGGTGCACACGAGGCTGCACCGCGGCGAGGGCACGCTGGCCTGCCACCTGTGCGGCACCAAGCTGCCCGGCCACAAGGAGCTCACGCGCCACATCGCCGACACGCACGCCGTGGACGGCGGCTTCCCCTGCAACGCCTGCCCCGAGGTGTTCGACAAACCGCGCCTGCTCAAGCAGCACCTGCACGCGCACTACGAGCGGGACTTCTCCTGCGACGTCTGCTCCAAGGTGTTCCGCCGCAAGAAGGGCCTCAAGGAGCACCTGAAGACGCACACCGGCGAGAAGAAGTTCACGTGCGACATCTGCAGCAAGTCGTTCGGCCACAACCAGACGCTCAAGTCGCACGTGTACACGCACACGGGCGAGCGGCCGCACGTGTGCGACGTGTGCGGGCGCGGCTTCCCGCAGCGCACGCACCTGCGCCGCCACATCCGCGTGCTGCACCACCAGCTGCGCCCGCACGCCTGCGCCGTCTGCCACAAGCACTTCTCCAGCAAGAGCTACCTGCGCGTCCACGAGCGCCAGCACAGCGGCGCGCGCCCCTACTCCTGCGACCTCTGCCAGCGCAGCTTCGCCGCATACACGACCCTCAAGGTGCACATGCGCGTGCACACCGGCCTCAAGCCCTACTCCTGCGACTTCTGCGGCCGCCAGTTCGCGCAGATGACCAGCTTCAAGCTGCACCAGCGCACGCACACCGGCGAGAAGCCGTACACGTGTAATGTTTGCAAGAAACCGTTCGCCGATAACGGTTACTTGAAAATCCACTTGAGGATCCACACGGAGGAGAAGCCGTACTCCTGCGAGATCTGCAAGCGCTGTTTCCGCGAGACGGGCCAGCTCAAGCGGCACCTGCGCATCCACTCCGGGGTCAAGGCGTACACGTGCCGGATATGCAACAAGCAGATCGGGAACCTGTCCAAGCACATGCGCGTCCACTCCGACGTTAAGCCGTTTTCGTGCACGATATGCAATAAAGAGTTTTCCGTGAACGGCAACTTGAAGTTGCACATGCGGACGCACACAGGGCTCAGGCCATATAGCTGCGAGCTATGTCACAGTCACTTCACACAAAGCAGCGGACTCAAAAGACACCGCTGTGCGCACAAAAGTGACGTTTGA

Protein

MSSSWNGFGLCRCCHSKGNFKTLTAPHTYEGKTEMYSEILLNTFELNVTKNSDSLDAYCICRRCETRLLDAAQFKRQVQECELNFYRILDYKDLQNFDELIKKENESTECEVFKSECLANEKTHNDHSDSKFEDDEKQFDAAQDHSSDFEDTPLSVLQSIKTNRQTDPADSEDKEPAKIEDLKRNCGKVKPKKYSCEICEKRFTYKGSLEVHTRLHRGEGTLACHLCGTKLPGHKELTRHIADTHAVDGGFPCNACPEVFDKPRLLKQHLHAHYERDFSCDVCSKVFRRKKGLKEHLKTHTGEKKFTCDICSKSFGHNQTLKSHVYTHTGERPHVCDVCGRGFPQRTHLRRHIRVLHHQLRPHACAVCHKHFSSKSYLRVHERQHSGARPYSCDLCQRSFAAYTTLKVHMRVHTGLKPYSCDFCGRQFAQMTSFKLHQRTHTGEKPYTCNVCKKPFADNGYLKIHLRIHTEEKPYSCEICKRCFRETGQLKRHLRIHSGVKAYTCRICNKQIGNLSKHMRVHSDVKPFSCTICNKEFSVNGNLKLHMRTHTGLRPYSCELCHSHFTQSSGLKRHRCAHKSDV

Uniprot

H9JNK7 A0A2H1W554 A0A437AYB1 A0A2H1VM89 A0A212F4R7 A0A3P9JDZ6 + More
A0A3Q3VVR4 A0A087YLI0 J9JNC1 A0A0L8FJF3 A0A3Q3LHM7 A0A3P9L618 A0A3P8SM50 I3KS80 A0A3B4GRL8 A0A3B3ILY9 A0A3Q1B6D0 A0A3Q3LIA9 C3ZDP0 A0A3Q3N1A2 J9K2Z9 J9L823 A0A3P9L518 H2YQC6 A0A3P9L697 A0A3P9JF51 A0A147AL85 A0A3P9I0N2

Pubmed

19121390 22118469 17554307 25186727 18563158

EMBL

BABH01035209 ODYU01006399 SOQ48210.1 RSAL01000274 RVE43139.1 ODYU01003064 + More
SOQ41364.1 AGBW02010319 OWR48738.1 AYCK01001272 AYCK01001273 ABLF02025528 KQ430326 KOF64322.1 AERX01021876 AERX01021877 AERX01021878 GG666612 EEN48846.1 ABLF02039175 ABLF02009695 ABLF02018750 ABLF02061073 ABLF02063523 GCES01007040 JAR79283.1

Proteomes

UP000005204 UP000283053 UP000007151 UP000265200 UP000261620 UP000028760 + More
UP000007819 UP000053454 UP000261640 UP000265180 UP000265080 UP000005207 UP000261460 UP000001038 UP000257160 UP000001554 UP000007875

PRIDE

H9JNK7

Pfam

PF00096   zf-C2H2        + More
PF07776   zf-AD
PF14291   DUF4371

Interpro

IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf
IPR012934   Znf_AD
IPR003656   Znf_BED
IPR017114   YY-1-like
IPR025398   DUF4371
IPR017125   Znf_PRDM5-like
IPR011017   TRASH_dom

SUPFAM

SSF57667 SSF57667

ProteinModelPortal

H9JNK7 A0A2H1W554 A0A437AYB1 A0A2H1VM89 A0A212F4R7 A0A3P9JDZ6 + More
A0A3Q3VVR4 A0A087YLI0 J9JNC1 A0A0L8FJF3 A0A3Q3LHM7 A0A3P9L618 A0A3P8SM50 I3KS80 A0A3B4GRL8 A0A3B3ILY9 A0A3Q1B6D0 A0A3Q3LIA9 C3ZDP0 A0A3Q3N1A2 J9K2Z9 J9L823 A0A3P9L518 H2YQC6 A0A3P9L697 A0A3P9JF51 A0A147AL85 A0A3P9I0N2

PDB

5V3M E-value=6.40359e-48, Score=483

KEGG

101744984 no KO assigned | (RefSeq) zinc finger protein OZF-like

GO

GO:0003676 GO:0008270 GO:0005634 GO:0000976 GO:0003677 GO:0016021 GO:0046872 GO:0005488 GO:0005507 GO:0004713 GO:0016491 GO:0015930

Length:

582

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00017

outside

1 - 582

Pi

2.858074

Theta

6.189095

Tajima's D

-2.416763

CLR

1.037464

CSRT

0.000699965001749912

Interpretation

Possibly Positive selection

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics