Gene

KWMTBOMO13456

Pre Gene Modal

BGIBMGA010886

Annotation

hypothetical_protein_KGM_07473_[Danaus_plexippus]

Location

Bomo_Chr22(-):17437810-17440630      View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Mitochondrial   Reliability : 1.693 Nuclear   Reliability : 1.432

CDS

ATGGAAACTGACGCAGAAGGATTCATATTACCGGTCGGAGGTTTAAGTGCCGCGAAATTAGTAGTCGGCGCTCGATTAGCTCCAGACGTCCACGCGCGGAACGCAGTCCTGTCTGTAGTCAGTCGGGAGAACCTCTCGCTGCAAATACGCATCGAAGCCGATATTCCGCCGCATCACGAACTTTTGCTGTGGCCCGACGAGCAGCTGTCGGCGATCGCTGCCGTACCGTTCTTGACGCCCAAGAATATATTCGGAAAGAATGAATACGTATGTCACGAGTGCAACTCACAATACGAGCACCCCAACCTACTGAAAGTTCATCTGTTGTTGGGTTGTTCGTCGCCAGACACCGCGCGTTTCTGGCGAACAATTACTAAACGACTCGGCGCTCCTAGTCAATCGGCATTCACTGTTTACTCGCGGCTACCATCGCCCACCATCATACCGGCTCTAGGCCCCGCGGAGCTAGAAGCCATCGCAGCTGAGTGGGGCAGATCGCGGGGGGCTCACGTATGCGTGTACTGCGGGAAAGCCTATTCAAGGAAATACGGTCTAAAGATCCACATTCGGACGCACACCGGTTACAGGCCGCTACGGTGTAGGTACTGCGCCAGAGCTTTTGGGGATCCGAGCAACTTGAACAAGCACGTGAGGCTGCACACGGGCGGCAGCGCGGGCGGCGCCCACGTGTGCCCCGCGTGCGGCCGCGCGCTGGCCAGGCGCCGCGACCTCGAGCGACACCTGCGCGCGCACGCCGCGGCCGACAGGTGA

Protein

METDAEGFILPVGGLSAAKLVVGARLAPDVHARNAVLSVVSRENLSLQIRIEADIPPHHELLLWPDEQLSAIAAVPFLTPKNIFGKNEYVCHECNSQYEHPNLLKVHLLLGCSSPDTARFWRTITKRLGAPSQSAFTVYSRLPSPTIIPALGPAELEAIAAEWGRSRGAHVCVYCGKAYSRKYGLKIHIRTHTGYRPLRCRYCARAFGDPSNLNKHVRLHTGGSAGGAHVCPACGRALARRRDLERHLRAHAAADR

Uniprot

H9JMY3   A0A212EYF1   A0A194REN6   A0A194PXK7   A0A154PU48   A0A2H1W692   + More
A0A182TZ43   A0A182NIH8   Q7Q672   A0A182KPG0   A0A182I1R5   A0A182UZ65   A0A182FCP9   A0A182Q6C7   A0A182X767   W5J943   A0A0N0BIT0   A0A182K9F4   A0A182SFI1   B0XA21   A0A0L7RIT8   A0A084W0S7   A0A336K394   A0A182LW35   A0A182ISR8   A0A182RWM6   A0A182GYG5   A0A182WKK1   A0A1J1IAI9   B4KWM9   A0A164TUT5   B4LHG1   T1GCB4   A0A3B0JVP6   B3MA07   Q9VRV0   B4HUR5   B3NGF2   B4PJE6   E9H9A2   A0A1W4UWX0   T1J9D1   B4QJB5   T1J3V0   A0A0M5JAZ3   A0A1B0DFR1   R7TYW3   A0A2J7R9E1   V3ZXR5   A0A3Q7SSE8  

Pubmed

19121390    22118469    26354079    12364791    14747013    17210077    + More
20966253    20920257    23761445    24438588    26483478    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    21292972    22936249    23254933   

EMBL

BABH01029054    AGBW02011571    OWR46474.1    KQ460323    KPJ15924.1    KQ459586    + More
KPI98076.1    KQ435119    KZC14730.1    ODYU01006581    SOQ48547.1    AAAB01008960    EAA11243.4    APCN01000091    AXCN02000482    ADMH02001837    ETN60972.1    KQ435726    KOX78161.1    DS232561    EDS43447.1    KQ414583    KOC70749.1    ATLV01019157    KE525263    KFB43821.1    UFQS01000067    UFQT01000067    SSW98957.1    SSX19339.1    AXCM01006428    JXUM01021118    JXUM01021119    KQ560591    KXJ81756.1    CVRI01000043    CRK95974.1    CH933809    EDW17476.1    LRGB01001725    KZS10773.1    CH940647    EDW68491.1    CAQQ02031364    OUUW01000009    SPP85133.1    CH902618    EDV41227.1    AE014296    BT028831    AAF50682.1    ABI34212.1    CH480817    EDW50686.1    CH954178    EDV51118.1    CM000159    EDW93614.1    GL732608    EFX71586.1    JH431971    CM000363    CM002912    EDX09424.1    KMY97885.1    JH431832    CP012525    ALC43606.1    AJVK01058932    AMQN01001967    KB307198    ELT99123.1    NEVH01006591    PNF37458.1    KB203251    ESO85776.1   

Proteomes

UP000005204    UP000007151    UP000053240    UP000053268    UP000076502    UP000075902    + More
UP000075884    UP000007062    UP000075882    UP000075840    UP000075903    UP000069272    UP000075886    UP000076407    UP000000673    UP000053105    UP000075881    UP000075901    UP000002320    UP000053825    UP000030765    UP000075883    UP000075880    UP000075900    UP000069940    UP000249989    UP000075920    UP000183832    UP000009192    UP000076858    UP000008792    UP000015102    UP000268350    UP000007801    UP000000803    UP000001292    UP000008711    UP000002282    UP000000305    UP000192221    UP000000304    UP000092553    UP000092462    UP000014760    UP000235965    UP000030746    UP000286640   

PRIDE

H9JMY3    Q9VRV0   

Pfam

PF00096   zf-C2H2

Interpro

IPR036236   Znf_C2H2_sf        + More
IPR013087   Znf_C2H2_type       
IPR001214   SET_dom       

SUPFAM

SSF57667   SSF57667       

ProteinModelPortal

H9JMY3   A0A212EYF1   A0A194REN6   A0A194PXK7   A0A154PU48   A0A2H1W692   + More
A0A182TZ43   A0A182NIH8   Q7Q672   A0A182KPG0   A0A182I1R5   A0A182UZ65   A0A182FCP9   A0A182Q6C7   A0A182X767   W5J943   A0A0N0BIT0   A0A182K9F4   A0A182SFI1   B0XA21   A0A0L7RIT8   A0A084W0S7   A0A336K394   A0A182LW35   A0A182ISR8   A0A182RWM6   A0A182GYG5   A0A182WKK1   A0A1J1IAI9   B4KWM9   A0A164TUT5   B4LHG1   T1GCB4   A0A3B0JVP6   B3MA07   Q9VRV0   B4HUR5   B3NGF2   B4PJE6   E9H9A2   A0A1W4UWX0   T1J9D1   B4QJB5   T1J3V0   A0A0M5JAZ3   A0A1B0DFR1   R7TYW3   A0A2J7R9E1   V3ZXR5   A0A3Q7SSE8  

PDB

1MEY     E-value=3.8377e-13,     Score=179

KEGG

101746608    no KO assigned | (RefSeq) zinc finger protein SNAI1

GO

GO:0003676   GO:0000122   GO:0003682   GO:0005634   GO:0046872   GO:0005622   GO:0005840   GO:0006412   GO:0005737   GO:0048869   GO:0016491   GO:0015930  

Length:

256

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.5357

Exp number, first 60 AAs:

0.5124

Total prob of N-in:

0.03481

outside

1  -  256

 

 

Pi

16.695756

Theta

17.891945

Tajima's D

-0.202484

CLR

2.020925

CSRT

0.32098395080246

Interpretation

Uncertain