Silkworm Genome Informatics Database

Gene

KWMTBOMO13189

Pre Gene Modal

BGIBMGA000362

Annotation

PREDICTED:_zinc_finger_protein_391-like_[Amyelois_transitella]

Location

Bomo_Chr22(-):9704116-9713676 View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear Reliability : 4.152

CDS

ATGCTGACAGCAATTGCCGATGTAAAAGTCTCTTGTAATGATGGACTACCTGAAAGGATATGCCTTAAGTGTTGCACGACTTTGGAAAAGGCGTACTTGCTCAAGACAGTTGCTGAGAGGTCTGACAGAAAACTTAGAAAACTTTTAGCTAAATCCAAAGGCAATGTACTAACAAAGAAGATAGCTTTTGACTCATTTACTGACATCAAAAGTGAAATTGGGACTATAAGTGTTAAATCAGAACCCAAATGGGATTTAGAATTGAGTCTTGACAGTGAGAATAAAATGCCTGTGGAAACAGTTGATGGAAAAGATATTGTAATTGCTAATACTGTAATAAGAAAGGTTGATTCTACTATGGATGCACCAAAGGTTGAAGTTATTGGTGAAGGCGATGCTGCTCAGATCACTTGGAATAAAAGGGAACCATCAGAGGATTCTGATGACGACTATGTGGATGCTGCTGTCCGAGATGATGATGACGATGACGATTACGTCCCACCAGTGGAAAATAAAAAAATAAAATTCAAGAAACCAAAACTGTCTGAAATAAAGGTTTTCAAGGAGAAACCCATTGTACGTAAAATCAAAGTGATCAAAAGGTACCGATCAGATGACAATGGTTCGAATTTATCTAATTTCAACACAAAAACAACTTCGATTACATGCTATCCCATTTTAAAGAATGGCACAAGAGGATCACCTATCATCTTGAAACGCCCTAAAGATTCAACATTACTAAAGGTGCACTCATCATATAAGCCTAGAACACAATCTACAGTTGATGGACCAAAGGCTATGCATAGAGAAAAACCTATACGCATGGTAAAAACTGCAACTCCAAAACAGAAGGAAAAACTTGTTTGTCCTGTTTGTGGTATACTAACATTTACTTTGGGTAACCATATGTCAACTCACCAAGAAAAAAAGCGATTTGCATGCCCTCAATGTCCTAGGACATTTGCTCAAAAGACAAATCTTCAGACTCACGTTAAACAGCATACTGGTATAAAGGATCACATTTGCGAGGTGTGTGGGGCTGGTTTCTACAGTCAGAAATCATTAGTCAGACACAATTTAATTCACAGAGGAGAAAGACCGTTCTCATGTAATTTGTGCAGCAAACGATTCATTGCTATGCAAAGTCTGCGCCGACACATGCGCATTCACACAGGGGACAAGCCCTTCAAATGTGATATCTGCAATAAAAGCTTTATACAGAACCACCATCTGCAAAATCATATGCTTACTCACACCGGAGATAAGCCGTACTCGTGCGAGGTATGCAACGTTGCCTTCAGCTACAAAGTGAACCTGAACAATCACGTTTTCAAAGCGCACGGCATAAATTTGAAGTTCAAATCTATTCACACGGTCACGGAAGATATTCTTCGTAGAGAGATGGGATTGGAGAACGAAGCGAATCTTACCATAGCGCACAAAATACCATACGAATAG

Protein

MLTAIADVKVSCNDGLPERICLKCCTTLEKAYLLKTVAERSDRKLRKLLAKSKGNVLTKKIAFDSFTDIKSEIGTISVKSEPKWDLELSLDSENKMPVETVDGKDIVIANTVIRKVDSTMDAPKVEVIGEGDAAQITWNKREPSEDSDDDYVDAAVRDDDDDDDYVPPVENKKIKFKKPKLSEIKVFKEKPIVRKIKVIKRYRSDDNGSNLSNFNTKTTSITCYPILKNGTRGSPIILKRPKDSTLLKVHSSYKPRTQSTVDGPKAMHREKPIRMVKTATPKQKEKLVCPVCGILTFTLGNHMSTHQEKKRFACPQCPRTFAQKTNLQTHVKQHTGIKDHICEVCGAGFYSQKSLVRHNLIHRGERPFSCNLCSKRFIAMQSLRRHMRIHTGDKPFKCDICNKSFIQNHHLQNHMLTHTGDKPYSCEVCNVAFSYKVNLNNHVFKAHGINLKFKSIHTVTEDILRREMGLENEANLTIAHKIPYE

Uniprot

H9ISY4 A0A194Q3F6 A0A194R646 A0A212EVC9 A0A1E1WC40

Pubmed

19121390 26354079 22118469

EMBL

BABH01013022 KQ459586 KPI97945.1 KQ460883 KPJ11336.1 AGBW02012225 + More
OWR45417.1 GDQN01006525 JAT84529.1

Proteomes

UP000005204 UP000053268 UP000053240 UP000007151

PRIDE

H9ISY4

Pfam

PF00096 zf-C2H2 + More
PF07776 zf-AD

Interpro

IPR036236   Znf_C2H2_sf        + More
IPR013087   Znf_C2H2_type
IPR012934   Znf_AD

SUPFAM

SSF57667 SSF57667

ProteinModelPortal

H9ISY4 A0A194Q3F6 A0A194R646 A0A212EVC9 A0A1E1WC40

PDB

2I13 E-value=1.08472e-29, Score=325

KEGG

101742415 no KO assigned | (RefSeq) myoneurin-like

GO

GO:0003676 GO:0008270 GO:0005634 GO:0046872 GO:0016887 GO:0005737 GO:0048869 GO:0016491 GO:0015930

Length:

485

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01673

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00416

outside

1 - 485

Pi

252.50112

Theta

210.662381

Tajima's D

1.148654

CLR

0.336865

CSRT

0.704214789260537

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics