Gene
KWMTBOMO12253
Annotation
PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Plutella_xylostella]
Location in the cell
Nuclear Reliability : 2.643
Sequence
CDS
ATGGCGGCCATCAGGGAGCGCTTAGGGCGGGCCCCCTCTGTGCGCCCTTACGGGTCAGGCTTCAGATTTCTGCCGGCGTCGGCAGAGGAGTATAGGGTGGTCCAAGCCTATCTCGCGGGAGCCTCCTCCGCTGACAGTGCCATTAAATGGTACTGTTACGCATTGGAGGAGGATATTCCCGCGAGAGTGGCAATTCGAGGCCTACCTGCCGACACCGACGCGGCAGAAATCGTAGACTCTTTAAAGGAGTTAGGGTTTCCGGCTCGTTATGCTCGGTGTATACGGGCCAAGAGAGGGCGGCCGGGTTGCGTCTTTTACGTAACCCTGGACCACCTCTCCAAGGATGACCTCGCCCGCTTGTACGCAGTTGAAGAACTGCTGTACTTGCCGGGGGTGTCAGTTGAGGGATGGCGTCCAAGCCGAGGACCTGCGCAGTGTCATCGCTGCCAGGCCTTCGGACACGCCTCCAACAACTGCCACCGAGCAGTCCGCTGCGTGCGATGTGCGGGTGAGCACATTGTGGCGGACTGCCCGAGGCCAAGGGAGGGACCCTTCATCTGCGCCAACTGCGGGAAGGGCCACGCCGCTGTTGACAAGCGGTGTGTGTTCTACCGCAGGAGGGCGCGGATGATGGGGGTCACTATTCCTCCCCCCGTACCGCCAGCGAGGCGCGCCGGTCAAGCCCCTACCCCTGCTCCACGTCCCGCACCAAGTCCATCTTGGAAGGGCAAGGGCAAGGGAAAGAGTTCACAAGCCCCCCCTTTCCCTCCGGTTAATACTCAACCTGCCACCGTGGAGGCCAGCGCAACAGCGGCTACCCTGATGGCAGAGGCGAACCCTCAACGACAGGCCATAAAGCCCCGCCCGGCCCCCCGTTCAATCAACAAGGCAGGGACTGATCTCCAACTCACTGTACTGACCAAATCTCAAAAAAAAAACAAAAAGAAAAAAATGAAAGCCAGAGAGAAGAAAAAAAAAGAAAAGGAAGAAGCAGCCGCCATGAGTGAAGGACAAGCTGCCCAGACGATCCAACCTCCATCTCCCATGGAGATAACAGTCACCGACCCGCCCCAGAACACGAATACTCTGGGCGACTCGCAGCCCCCACTTCCTCCCCGCCCGCAGCGGGAGAGGCGCAGAGATCGGCAGGACACGCAGCCTGTCGGCCTCGCTGCCTGGCTCCTCTCCCTGTGGGAGAAACTGTCCGAGCGCAGCTCAATGGCTAGCCAAGAGCTGCGCATCATCTACTGGAACCCCGACGGGATAGGGTCCCGGAGGCCGGAGCTCATCCGACTCGCCCAAGAGCATGACCCGCAGGTCATCCTCTTGGGCGAGACCAAACTCAAACCTCGACAAGATTTTAGGATGCCCAACTACTTCGTGTACCGACGGGACGAACTGACCTCCAACGGGCGCCCGTTCAGGGGCACTGCGGCGCTCGTCAGGAGGGACGTGGTGCACGAGGAGCTTGAGCTACTGACCTTCGCCTCTACCAGAACGGTCGGGGTGAGGGTTCACGTACTGGGGGCCGAATTGCGGATTTATGCCGCGTATCGACCCCCGGGTCCTGATTTTGTCGAGGACGATATTAGACGGGCCTTGAACCATGATCGCCATCCGGCCTTGGTGGTCGGGGACCTCAATGCGAAACATGTCGCTTGGGGCTCCCGAATCATCACGGCGCCCGGAAGGCGATTGTACGAGGATGCCGAAAGGGGGGACTACTGCGTGGTCGGCCCCAACGAACCCACTCACGTTCCAACGTTGGCCCGGTACCAACCGGACGTCTTGGACGTGTGTGTACACAAGGGGTTACGGTGCCCTCTAGCGATAGAGGCACTGTACGACCTGAGTACCCCTCACCTACCGATCTTGGTCTCGGTGGGTTTGGGGCTCACTCGGGTCGCGACATCCCCTCTCAGGCCTAGGGTCGACTGGCAGTCCTTTACGGGACTGCTGGCCGACCAATCCTTGTTTCAAGACCCGTCTACCCCTGATGAGGTCGACACGGCGGCTTCCCGTCTCGTCGACACCATCAGGGGAGCCCTGGACCAAGCGACGACTCTGGTACCCAGCGGGGGGCCCAGAGTGGAACTCCCGGTGCACCTCAAGACGTTAATTCGTCGGAAGAGGGCACTGAGGAGGCTCTGGGCGACATCTAGGTGTCCCAGGATCAAGCGCGAGCTAAACCGACTTGAGGATGAGCTGGCGACTAAGATGCGGACTTTCCGGGGTGACTCCTGGGAGGGGGGACTGTTGGACGCGTCCGACGACCGTACGATGGCCCCCCTTCACCGCATCTGTCGCCGGCTCACCCACAAGCCTTCCCCCACTTGTCCCCTGGAGGATGAGGCGGGAAGACGGTGTTTTACACCGGTGGCTCGTGCCGAAGTCCTGGCCAACTCGCTGGAGGGGCAGTTCACTCCGAATGTCTCTGCGCCCTCGATGGTTGCATTCCATCGGGAGGTGGCAGAGGGTGTAATCCAACTCCTCAAACCGGAATCGCCGGGAGTCGAGCTGGGAGATGACGATCTAGTCACTCCCAGCGAGGTGCGCCTCCTCATCAAGTTGATGAAGAGGCGCAAAGCCCCCGGCGAGGACTGTATTCCTCCCCTCGCCCTGCAAAACCTCCCACCCTCAATCGTGTCAGCAATGACACGATTGTTTAATTCCATTCTCCGGGTAGGACACTTCCCTGGAACTTGGAAATTGGGCAAGATTATCGTCTTGCCCAAACCCGGCAAGGACAGGAGAAAGCCCTCCAGTTACCGACCGATTACCTTGCTGTCGCACGTGGGCAAGTTGTTCGAGCGGCTGCTCCTGAGGAGAATATCGCCGTATATTCTCCTCAGGCCGGAGCAATTCGGCTTTAGAAGCGGCCACTCGACGACTCTGCAACTGACCCGTGTCCTGCATCACTTGGCGGACCGGCGTAACTCGGGCCAATACACGGTCGCAGTCCTTCTCGATATCGAGAAGGCCTTCGACCGTGTGTGGCACGAGGGGTTGGTCCACAAGCTGCGGGACGCGGGCCTACCGCACGCTCACGTGCGACTGCTCGGGTCGTATCTGGAGGGCAGAACCTTCTTTGTCGCGGTCGAGGGCGCTCGGTCTTCCGTGCGTCCCATTACGGCCGGAGTTCCTCAGGGTAGTGTCCTATCACCTATCCTATACGCCCTCTACACCAATGACATCCCCACCCTGGAGGGTCACCTTCGAGCGTGGGAGGAGGACGTGAAGTTGGCCTTGTTCGCAGATGACTCGGCCTACTTCTCGTCCTCTCCGTTCCCCTCTGCAGCCATTATGAGGATGCAGAGGCTTTTGGATTTACTGCCCCAGTGGCTGGACCGTTGGAGAGTCGCGGTCAATGTGGGAAAGACCGCGGCCTTGCTCTACGGTCCGGTCCGTATTAGAGTCGTCCCCAAGAAACTCAGTCTCCGAGGTGTGAATGTCGAGTTCAGGACCATGGTCCGGTATCTCGGGTGCGACATCGACCGCTCCTTGAGCATGGTCGCGCACGTCAACCGAGTCATCGGTCAGACTCGCGCGGCCAGGTTCTTGCTGCGGCCGGTACTTGCGTCCGGGCTTCCGACCAGGACCAAACTCGCCATTTACAGGACATACGTCCGTTCCCGCCTCACATACGCTGCTGAGGCCTGGTATCACCTGTTGTCGCCGTCCCAGCGATCTAGGTTGCAGGCCCAGCAGAGTCTTTCCCTCCGTACTATCGTCGGGGCCGGGCGGTACGTCAGAAATGACGTCATCGCCCGGGACCTAGGGGTGGAGTCGCTCAGGGAGTTCGTGACTAGGCTCGCTCGTAATATGTACGAGCGAGCCGAAAACGGCCCCCATGAGCATCTCCACAACATAGCCCCGCTGCACGCCAGACCACCCGATGGTACGGCGTTGCCGCGGGAGCTATTGGTACCCCCGACGATCGTTCGGAGATAA
Protein
MAAIRERLGRAPSVRPYGSGFRFLPASAEEYRVVQAYLAGASSADSAIKWYCYALEEDIPARVAIRGLPADTDAAEIVDSLKELGFPARYARCIRAKRGRPGCVFYVTLDHLSKDDLARLYAVEELLYLPGVSVEGWRPSRGPAQCHRCQAFGHASNNCHRAVRCVRCAGEHIVADCPRPREGPFICANCGKGHAAVDKRCVFYRRRARMMGVTIPPPVPPARRAGQAPTPAPRPAPSPSWKGKGKGKSSQAPPFPPVNTQPATVEASATAATLMAEANPQRQAIKPRPAPRSINKAGTDLQLTVLTKSQKKNKKKKMKAREKKKKEKEEAAAMSEGQAAQTIQPPSPMEITVTDPPQNTNTLGDSQPPLPPRPQRERRRDRQDTQPVGLAAWLLSLWEKLSERSSMASQELRIIYWNPDGIGSRRPELIRLAQEHDPQVILLGETKLKPRQDFRMPNYFVYRRDELTSNGRPFRGTAALVRRDVVHEELELLTFASTRTVGVRVHVLGAELRIYAAYRPPGPDFVEDDIRRALNHDRHPALVVGDLNAKHVAWGSRIITAPGRRLYEDAERGDYCVVGPNEPTHVPTLARYQPDVLDVCVHKGLRCPLAIEALYDLSTPHLPILVSVGLGLTRVATSPLRPRVDWQSFTGLLADQSLFQDPSTPDEVDTAASRLVDTIRGALDQATTLVPSGGPRVELPVHLKTLIRRKRALRRLWATSRCPRIKRELNRLEDELATKMRTFRGDSWEGGLLDASDDRTMAPLHRICRRLTHKPSPTCPLEDEAGRRCFTPVARAEVLANSLEGQFTPNVSAPSMVAFHREVAEGVIQLLKPESPGVELGDDDLVTPSEVRLLIKLMKRRKAPGEDCIPPLALQNLPPSIVSAMTRLFNSILRVGHFPGTWKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYILLRPEQFGFRSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLPHAHVRLLGSYLEGRTFFVAVEGARSSVRPITAGVPQGSVLSPILYALYTNDIPTLEGHLRAWEEDVKLALFADDSAYFSSSPFPSAAIMRMQRLLDLLPQWLDRWRVAVNVGKTAALLYGPVRIRVVPKKLSLRGVNVEFRTMVRYLGCDIDRSLSMVAHVNRVIGQTRAARFLLRPVLASGLPTRTKLAIYRTYVRSRLTYAAEAWYHLLSPSQRSRLQAQQSLSLRTIVGAGRYVRNDVIARDLGVESLREFVTRLARNMYERAENGPHEHLHNIAPLHARPPDGTALPRELLVPPTIVRR
Summary
Uniprot
Pubmed
Proteomes
Interpro
SUPFAM
SSF56219
SSF56219
Gene 3D
ProteinModelPortal
PDB
6AR3
E-value=8.26531e-05,
Score=114
Ontologies
GO
Topology
Length:
1316
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01085
Exp number, first 60 AAs:
0.00078
Total prob of N-in:
0.00006
outside
1 - 1316
Population Genetic Test Statistics
Pi
420.7669
Theta
196.273988
Tajima's D
3.328393
CLR
0.095271
CSRT
0.990150492475376
Interpretation
Uncertain
