Gene
KWMTBOMO11842
Pre Gene Modal
BGIBMGA004430
Annotation
PREDICTED:_oocyte_zinc_finger_protein_XlCOF6-like_isoform_X2_[Bombyx_mori]
Transcription factor
Location in the cell
Nuclear Reliability : 4.568
Sequence
CDS
ATGCCTGAACTAAAAGTATGCCGGGTATGCCTCAACAAAGATGTTACAATGTATAAATACGATCGATTCCAGTTAAAGTGTTTTTATGAAGAAATTATGGCTGAAAAGATTGACCATCGGGACGGACTACCTCAGTGCTTCTGTTATGAATGTGCCACAATGCTGTATAAATTCCACAAATTTAAGGAGAAATGCAAAATTGGACAGAAAACCCTCAAAGAGATCCTTATCAAAGGAAGTCTTACTTACACATCTGTAAATAGAATAGACAGAGAGAAAAAGAATCTAAAATCTAATCTAGGTATAGTCATCGCAAATGAAAGAGTAAAAACACAGGTAATAAGACACCGAAGTTCAAATTATGAAACAAGGGTTCCGGAAATCGAAAAAATTGAAATTGATTCTCAGAGTGACTATTCAGATGTCCAAGAACGTAACAACTCCGATTATGATATAGATGAAACTGCTGTAGAAGAAGTAGTTGTTGAGGACAAAAAGAATTTAGAGCTTGTGTTCACAGATAATGTAATACCATTACTGAATGAGCAGGAAGACAAGGTTTTCACTGAACCTTTACTAGTTGATGAGAAAGTAGATGATGAACCTATTCAACCTATTGAAGACCCGTCCCTTAAGATAGAAGAAGATAAATTCTCATCTGACGATGAAGTATTAATTAAAATAAAAAAACCTGTCATAGAAAAGAGAGTTACTAGAAAAAAGAAATCAGATTGCATAAAAAATGGGAAAGAAATTAAAAAGAAATTATTTAAGAAGCCAAAGAAGGTAGAAGATATGGAAACGGAGAAATTTAAAGCTGAAACAAAGAGAGCTAATTATTTGAACCCTAAAAACTGGTTAACTGTTTACCTTTCAGAAGAAGAGGCTGAGAAGAGTTTTAAGGCCAAAGCAGAAGATCCCAAGTTCTTGAAGTCTCCTTTTAGATGTTATCAGTGTTATAAAGGGTTTTCAAAACAGGATATGCTGGACAGACACACTAAATTACGTCATTCTGAGACTCTCGGACCAATCGAATGTAAGTTCTGTCACATGCGTTTCAAATGGAAGTGCTTTCTGAACAGACACATGCCCCGACATTACACTATATACAAATGTTTGAGATGTAATTTAACTTGTACGATTGAATCATCTGCAGTATTCCATGAAGATTATCACAATGGTGTAATAAGGAAATGTAAGCATTGTGGGGAAGAATTTAGGCACTCGTCGACGTACTACACGCACCTGCGCACGCACCGCAGCCAGTACCTGTGCACGCTGTGCGGCGTCTCGTTCGTGAGCGAGGCCGGCCTGCATCTGCACAAGCTGGCCAAGCACATCGACGACAAGCCGTCCGCAGGAGGCGCGAAGCAGCAGGGCGAGGTGAACACGTACTGCGAGCGCTGCGACATCAAGTTCGAGACGAAGGAAGCTTTTGAGGAGCATCTTTTTCACTCAGACATGCACTCAGTGGAGCCAGAAGCGATGGCTGAAGACGTACCGGCGCCGGCCTGTCCCAAGGTGCTGAGGCGGAAAGGGACGAGGACGCCCCGGAAGCCGACCACTTGCAGCTACTGCGGCAAGGTGTTCCCGACGCAGGCGGCCTGCATGAAGCACCACCACTCCGAGCATCCCCGGACGCCGTTCTTCCCGAACGAGCCGCGCCACATCTGCGAGATATGCGGCGTCTCGCTGGCTCCGGTGAGCATCCAGTCGCACCTGAACACGCACACGCGCGAGCGCCTGTACACGTGCACCACGTGCGGCGTCGTCTTCAACTCCAAGAGCAGCTGGACGAGGCACCAGCTGACGCACACTGGCGAGAAGCCGTTCGCGTGCTCCTTGTGCGACAAACGCTTCACGCAAAGCAACAGCGTCAAGCTCCACTACAAGACTTTCCACCTCAAGGAACCGTATCCCAAGAGAAACCGTAGGAAGAAAGGGGAAGATGGCGCCCTCCAGGATGACTTCAGAGCGGAGGCCGAATCGGAATCACTAACGCTCGACAGATGGCGCTGA
Protein
MPELKVCRVCLNKDVTMYKYDRFQLKCFYEEIMAEKIDHRDGLPQCFCYECATMLYKFHKFKEKCKIGQKTLKEILIKGSLTYTSVNRIDREKKNLKSNLGIVIANERVKTQVIRHRSSNYETRVPEIEKIEIDSQSDYSDVQERNNSDYDIDETAVEEVVVEDKKNLELVFTDNVIPLLNEQEDKVFTEPLLVDEKVDDEPIQPIEDPSLKIEEDKFSSDDEVLIKIKKPVIEKRVTRKKKSDCIKNGKEIKKKLFKKPKKVEDMETEKFKAETKRANYLNPKNWLTVYLSEEEAEKSFKAKAEDPKFLKSPFRCYQCYKGFSKQDMLDRHTKLRHSETLGPIECKFCHMRFKWKCFLNRHMPRHYTIYKCLRCNLTCTIESSAVFHEDYHNGVIRKCKHCGEEFRHSSTYYTHLRTHRSQYLCTLCGVSFVSEAGLHLHKLAKHIDDKPSAGGAKQQGEVNTYCERCDIKFETKEAFEEHLFHSDMHSVEPEAMAEDVPAPACPKVLRRKGTRTPRKPTTCSYCGKVFPTQAACMKHHHSEHPRTPFFPNEPRHICEICGVSLAPVSIQSHLNTHTRERLYTCTTCGVVFNSKSSWTRHQLTHTGEKPFACSLCDKRFTQSNSVKLHYKTFHLKEPYPKRNRRKKGEDGALQDDFRAEAESESLTLDRWR
Summary
Uniprot
EMBL
Proteomes
PRIDE
SUPFAM
SSF57667
SSF57667
ProteinModelPortal
PDB
5V3M
E-value=3.88369e-17,
Score=218
Ontologies
GO
PANTHER
Topology
Length:
672
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0019
Exp number, first 60 AAs:
0.00013
Total prob of N-in:
0.00050
outside
1 - 672
Population Genetic Test Statistics
Pi
185.682958
Theta
23.137139
Tajima's D
0.273265
CLR
0.391951
CSRT
0.459327033648318
Interpretation
Uncertain
