Gene

KWMTBOMO11294

Pre Gene Modal

BGIBMGA002752

Annotation

PREDICTED:_zinc_finger_protein_658_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr19(-):2606793-2612725      View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 4.602

CDS

ATGTCTCTAGCTAGAGTGCATATAACGCCCAATGACGGATTACCGAGCACAATTTGCACGAAATGTATTACAAAACTGGACGAATGTATTGAATTCATACGTCTCTGTGAAAGGAGCGATGTCGAACTTAGGTTATCGTTAGAGAATATTGTTAAAAAGAGAAAACTGAAAGCCGAGGAACTTTGCGTGGACGAAGACGGTTCTTCGCCTTCGAGAACCGAAAACGAAAAGAGTCCTGTTGTTGATGAGAACAACTGTGAAATTACAAGTGATCTTCACAAAGATGTGTATGACAAAAATGATAAAAAAAGACGTAAACAGCAATGTTTTACATGTGGCAAAGTTATGTCTTCAAGATTCCGGTTAAAAACCCATTTAATTACACACACAGGAGAGAAGCCATTCTCATGTCCGCACTGCAGCAAATGTTTTTCACTGTCACAAAACTTAAAAGTACATATGAGAACACACACGGGTGAGAAGCCCCTTCAATGTAGTGTTTGTGGAGAATCGTTTGCACAGTCTGCTGGATTGGCGGCGCACCGTCGAAAGCACACGGGACAGATGCCTTATAGCTGTGTATTGTGTCCACGTCGTTTTCGTACCGTGGGACATTTACAATATCATGTTAGGCGACACACTGGTGAAAAGAACTATGAATGCGACACGTGTAGCCGAGCCTTCATAACAAGAAGCGATTTAAAGCAACACATGCTCACGCACACGGGCGATCGTCCTCACGTATGCAGCATATGCGGAATACGTCTTACAAGGTCTTCACACCTCAAAAGACATATACAACAAATACACAATTCCCAAAAGGCTAATGTTAAGGTGGAGTGCTTTAAAACAAATGAAAAAGTTTGA

Protein

MSLARVHITPNDGLPSTICTKCITKLDECIEFIRLCERSDVELRLSLENIVKKRKLKAEELCVDEDGSSPSRTENEKSPVVDENNCEITSDLHKDVYDKNDKKRRKQQCFTCGKVMSSRFRLKTHLITHTGEKPFSCPHCSKCFSLSQNLKVHMRTHTGEKPLQCSVCGESFAQSAGLAAHRRKHTGQMPYSCVLCPRRFRTVGHLQYHVRRHTGEKNYECDTCSRAFITRSDLKQHMLTHTGDRPHVCSICGIRLTRSSHLKRHIQQIHNSQKANVKVECFKTNEKV

Uniprot

H9IZR7   A0A194QVI8   A0A2A4JBW9   A0A1E1WBG0   A0A212EZF7   A0A0L7KPL2   + More
A0A067QJV0   D6WRY3   A0A1W4X3I9   A0A1W4WSL7   A0A0R4IK02   D6X4Z7   A0A3Q3WUU5   H0WEH2   A0A3B5ANR5   A0A067QUP7   A0A1Y1LM06   D2A4T6   X1WDE0   A0A3Q2Y524   A0A3Q0QQM0   A0A3B4F3E6   A0A3P9BIN9   H0WE97   E7FBG8   A0A3Q1BNU3   A0A3Q1B9J2   E9QEE1   A0A3B5KSU7   A0A3P8SNY2   A0A3Q2YG62   H0WFB6   A0A3Q1GN24   A0A3P9DJ97   A0A3P8SM75   A0A3B3E376   A0A3B4C6H1   A0A3Q1F3M0  

Pubmed

19121390    26354079    22118469    26227816    24845553    18362917    + More
19820115    23594743    28004739    25186727    29451363   

EMBL

BABH01039980    BABH01039981    BABH01039982    KQ461073    KPJ09553.1    NWSH01001952    + More
PCG69587.1    GDQN01006714    JAT84340.1    AGBW02011289    OWR46885.1    JTDY01007689    KOB65011.1    KK853387    KDR07946.1    KQ971351    EFA06600.1    BX936382    KQ971381    EEZ97217.1    BX005326    BX088547    KDR07952.1    GEZM01051856    GEZM01051855    JAV74663.1    KQ971344    EFA05179.2    BX897726    CU457794    CR931788    CR790365    BX914205   

Proteomes

UP000005204    UP000053240    UP000218220    UP000007151    UP000037510    UP000027135    + More
UP000007266    UP000192223    UP000000437    UP000261620    UP000261400    UP000264820    UP000261340    UP000261460    UP000265160    UP000257160    UP000261380    UP000265080    UP000257200    UP000261560    UP000261440   

PRIDE

H9IZR7   

Pfam

PF05175   MTS        + More
PF14712   Snapin_Pallidin
PF00096   zf-C2H2
PF07776   zf-AD
PF12171   zf-C2H2_jaz

Interpro

IPR028119   Snapin/Pallidin/Snn1        + More
IPR007848   Small_mtfrase_dom       
IPR012934   Znf_AD       
IPR004557   PrmC-related       
IPR036236   Znf_C2H2_sf       
IPR013087   Znf_C2H2_type       
IPR029063   SAM-dependent_MTases       
IPR002052   DNA_methylase_N6_adenine_CS       
IPR022755   Znf_C2H2_jaz       
IPR017114   YY-1-like       

SUPFAM

SSF53335   SSF53335        + More
SSF57667   SSF57667       

ProteinModelPortal

H9IZR7   A0A194QVI8   A0A2A4JBW9   A0A1E1WBG0   A0A212EZF7   A0A0L7KPL2   + More
A0A067QJV0   D6WRY3   A0A1W4X3I9   A0A1W4WSL7   A0A0R4IK02   D6X4Z7   A0A3Q3WUU5   H0WEH2   A0A3B5ANR5   A0A067QUP7   A0A1Y1LM06   D2A4T6   X1WDE0   A0A3Q2Y524   A0A3Q0QQM0   A0A3B4F3E6   A0A3P9BIN9   H0WE97   E7FBG8   A0A3Q1BNU3   A0A3Q1B9J2   E9QEE1   A0A3B5KSU7   A0A3P8SNY2   A0A3Q2YG62   H0WFB6   A0A3Q1GN24   A0A3P9DJ97   A0A3P8SM75   A0A3B3E376   A0A3B4C6H1   A0A3Q1F3M0  

PDB

2I13     E-value=1.05288e-33,     Score=357

KEGG

101745527    no KO assigned | (RefSeq) zinc finger protein 658

GO

GO:0008168   GO:0005634   GO:0003676   GO:0008270   GO:0046872   GO:0042555   GO:0006260   GO:0006811   GO:0005622   GO:0006810   GO:0003824  

Length:

288

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.02541

outside

1  -  288

 

 

Pi

158.827718

Theta

164.148199

Tajima's D

0.51637

CLR

0.013723

CSRT

0.520973951302435

Interpretation

Uncertain